Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0750 ATGCCGGTGATCGGCGATTCCGCTCTACCTAACTCCTCCGCCACCGTCTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCGTGGATCGTCAAACTCCTCCTCCAAAAAGGCTACACCGTCAGAGGAACTGTCAGAAATCCAGAGGATCCGAAGAACGGCCATTTGAGAGAGTTCGAAGGCGCGGCGGAGCGGCTCAGTTTGCATAAATCCGATCTGCTCGATTTCGAGAGCCTTAGAGCTGCGATTGACGGCTGCGATGGCGTCTTTCACACGGCCTCGCCTGTTACTGACGATCCGGAGCAAATGGTGGAGCCGGCGGTGAACGGCACGAAGAACGTCATAGTCGCGGCGGCGGAAGCCAAAGTCCGTCGCGTGGTGTTCACTTCCTCGATTGGTGCAGTCTACATGGACCCCAACCGTGGTCCAGACGAGGTCGTAGACGAGTCCTGTTGGAGCGATCTCGAGTTCTGCAAAAACACCAAGAATTGGTACTGCTATGGGAAGGCAGTGGCGGAGAAAGCTGCATGGGAAGTGGCGGAGGAGAAAGGAGTGGACTTGGTGGTGGTGAATCCGGTGCTGGTGTTGGGGCCATTGTTGCAGCCCACCATCAACGCCAGCATCATTCATGTACTGAAATACCTGACCGGATCAGCCAAGACCTACGCCAACTCGGTCCAGGCGTACGTAGACGTCAAGGATGTGGCTCTCGCTCATCTCCTCGTCTACGAGACTCCCTCCGCCACCGGCCGCTACCTCTGCGCCGAGACCGTGCTTCACAGAGGAGAGGTTGTGGAGATCCTGGCCAAGTTGTTCCCTGAATATCCTGTTCCCACCAAGTGCTCAGATGAAGTGAACCCAAGGAAAAAGGCATACAACTTCTCCAACCAAAAGCTCAAGGACTTGGGATTGGAGTTCACTCCAGTGAAGCAGAGTCTATATGAGACTGTTAAGAGCTTACAAGAGAAGGGTCATCTTCCAATTCCCACTTCTACTCAACCAGCAGAGTCTATTCAAATTCAATCTTGA 1026 54.78 MPVIGDSALPNSSATVCVTGAGGFIASWIVKLLLQKGYTVRGTVRNPEDPKNGHLREFEGAAERLSLHKSDLLDFESLRAAIDGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRGPDEVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEVAEEKGVDLVVVNPVLVLGPLLQPTINASIIHVLKYLTGSAKTYANSVQAYVDVKDVALAHLLVYETPSATGRYLCAETVLHRGEVVEILAKLFPEYPVPTKCSDEVNPRKKAYNFSNQKLKDLGLEFTPVKQSLYETVKSLQEKGHLPIPTSTQPAESIQIQS 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5602675 5609518 + Sed0015980.1 Sed07g0750 719614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0750 341 CDD FR_SDR_e 16 303 - -
Sed07g0750 341 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 15 318 IPR050425 GO:0016616(PANTHER)
Sed07g0750 341 Pfam NAD dependent epimerase/dehydratase family 16 247 IPR001509 -
Sed07g0750 341 Gene3D - 7 340 - -
Sed07g0750 341 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 320 IPR036291 -
Sed07g0750 341 FunFam Cinnamoyl-CoA reductase 1 7 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g1155 Sed-Chr5:12610736 Sed07g0750 Sed-Chr7:5602675 2.50E-84 dispersed
Sed06g1886 Sed-Chr6:43208743 Sed07g0750 Sed-Chr7:5602675 6.00E-67 dispersed
Sed06g2054 Sed-Chr6:44617769 Sed07g0750 Sed-Chr7:5602675 1.20E-144 dispersed
Sed06g2055 Sed-Chr6:44628048 Sed07g0750 Sed-Chr7:5602675 4.30E-145 dispersed
Sed06g2056 Sed-Chr6:44632552 Sed07g0750 Sed-Chr7:5602675 5.10E-86 dispersed
Sed06g2057 Sed-Chr6:44635295 Sed07g0750 Sed-Chr7:5602675 8.30E-33 dispersed
Sed07g0750 Sed-Chr7:5602675 Sed13g1498 Sed-Chr13:20200429 4.20E-79 dispersed
Sed01g2394 Sed-Chr1:17976407 Sed07g0750 Sed-Chr7:5602675 7.60E-78 transposed
Sed07g1823 Sed-Chr7:21025021 Sed07g0750 Sed-Chr7:5602675 3.10E-66 transposed
Sed09g1401 Sed-Chr9:37893577 Sed07g0750 Sed-Chr7:5602675 1.10E-134 transposed
Sed05g1400 Sed-Chr5:27311615 Sed07g0750 Sed-Chr7:5602675 2.40E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0750 K09753 - csv:101213412 585.489