Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g0780 | ATGGAAGGTATCTCGCTTCACGGAACGCTTCACGCCACGATCTATGAGGTCGATAAGTTGCATCATGGTGATGGTGGTGCTGGTGGATCCAACTTCTTCAGCGCGTTAAAGCAAAACATTGAGGAGGCTGTTGGACTTGGAAAAGGAGTTACCAAACTATATGCGACTATAGATTTAGAAAAGGCTAGAGTTGGGAGGACACGACTATTGGAAAGTGATCCCCATAACCCAAGGTGGTATGAATCTTTTCACATCTACTGTGCTCACAGGGCATCAAATGTTGTCTTCACCGTGAAGGATGACAATCCCATCGGTGCAACTTTGATTGGGCGCGCATATGTACCTGTGGAAGACCTCGTCGATGGGGAGGAAGTCGATAGGTGGGTTCCAATCTTAGATGAAGAGAAAAATCCAATTGAAGGAGATTCTAAGATTCATGTCAAGCTCCAATACTTTAATGTTACCAAAGATCGTAATTGGGGTCGAGGTATACGAAGCCGCAAATTTCCTGGAGTGCCATACACATATTACCCACAGAGAGAAGGTTGTCGGGTCTCTTTGTATCAAGATGCTCATATCCCTGATAAGTTTATTCCTAAAATACCTCTTGCTGGAGGAAAGCATTATGCTCCCGCCAGATGTTGGGAAGATATTTTTGATGCCATACGAAATGCAAAACACATGATCTACATCACAGGATGGTCTGTTTATACAGAAATTGCCTTGATAAGGGACTCGAGGAGGCCGAAGCCTGGAGGAGAAACCATGCTTGGTGAGCTGCTTAAGAAGAAAGCAAGTGAAGGCGTCAGAGTTCTTATGCTTGTGTGGGATGATAGAACATCAGTCGGTTTACTGAAAAAGGATGGTCTGATGGCGACTCATGATGAAGAAACTGCAATTTACTTTCAAGATACTGATGTGCACTGTGTCTTGTGCCCTCGTAATCCTGATGATGGTGGAAGCATTGTTCAAGATCTACAAATCTCTACCATGTTCACCCATCATCAGAAGATCGTTGTGGTGGATAGCCCAATGCCGAGTGGAGATTCGGGTCAGAGGAGAATTGTGAGTTTCGTCGGTGGCCTTGACCTCTGCGATGGTAGGTACGACACGCCCTTTCATTCCCTTTTCAGGACATTGGATACTGCACATCATGATGATTTCCATCAACCAAATTTCCCTGGTGCATTGATAACAAAAGGTGGACCACGGGAACCCTGGCACGACATCCATTCCCGGCTTGAAGGCCCCATTGCCTGGGATGTCTTATTCAATTTTGAGCAAAGGTGGAAGAAACAAGGTGGGAAGGATATACTTGTGCAGCTTCGAGAGCTTGAAGAAATAATTATTCCTCCATCTCCTGTTATGTACCCCGATGACCATGAAATTTGGAGTGTTCAATTGTTTAGATCAATAGATGGTGGGGCAGCTTTTGGCTTTCCCGATACCCCCGAAGATGCTGCTAAAGCTGGTTTAGTCAGTGGGAAAGATAACATTATTGATCGAAGCATTCAAGACGCTTACATTAATGCTATTAGGCGGGCTAAGAATTTTATTTATATTGAAAACCAATATTTTCTTGGAAGTTGTTTTGGATGGTCCCCTGATGACATCAAGCCTGAGGATATTGGTGCCTTGCACTGTATCCCAAGAGAGCTTTCCCTCAAGATCTGTAGTAAGATTGCAGCAGGGGAAAGGTTCACTGTGTATGTAGTTGTTCCAATGTGGCCAGAAGGATTGCCAGAAAGTGGATCAGTTCAGGCAATATTAGATTGGCAGAGGAGGACATTTGAAATGATGTATAAAGATGTGATCCACGCTCTTCGAGAACAAGGTATCGACGAAGACCCCCGTAACTACTTGACATTCTTCTGTCTTGGCAATCGGGAAGTCAAGAGGTCCGGAGAATATGAACCTACAGAAGCACCAGATGAGGATTCTGATTATATGAAAGCCCAACAAGCCAGGCGTTTCATGATTTATGTTCACACCAAGATGATGATTGTGGATGATGAGTACATAATTGTTGGATCGGCCAATATCAACCAAAGATCCATGGATGGTGCAAGGGACTCTGAGATAGCTATGGGCTCTTATCAGCCATATCATCTGTCAACCCACGAACCTGCACGTGGTCAAGTTCACGGATTCCGTATGGCTCTATGGTATGAACACCTTGGCATGCTTGATGGAACATTCCTTCGGCCAGAAAGCGAAGAATGTGTTTCGAAGGTTAACCGAATGGCTGATAAGTATTGGGATCTGTATTCAAGTGAAGCACTTGAGAGGGACTTGCCTGGTCACCTCCTCCGCTATCCTGTCGGCATAAGCAGCGAAGGAAATGTCACTGAGCTCCCAGGATGCGAGTTCTTCCCCGACACCAAAGCTCGTGTACTCGGAACCAAATCTGACTACCTACCTCCCATTCTCACTACTTAA | 2439 | 45.06 | MEGISLHGTLHATIYEVDKLHHGDGGAGGSNFFSALKQNIEEAVGLGKGVTKLYATIDLEKARVGRTRLLESDPHNPRWYESFHIYCAHRASNVVFTVKDDNPIGATLIGRAYVPVEDLVDGEEVDRWVPILDEEKNPIEGDSKIHVKLQYFNVTKDRNWGRGIRSRKFPGVPYTYYPQREGCRVSLYQDAHIPDKFIPKIPLAGGKHYAPARCWEDIFDAIRNAKHMIYITGWSVYTEIALIRDSRRPKPGGETMLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETAIYFQDTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSPMPSGDSGQRRIVSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGALITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWKKQGGKDILVQLRELEEIIIPPSPVMYPDDHEIWSVQLFRSIDGGAAFGFPDTPEDAAKAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCFGWSPDDIKPEDIGALHCIPRELSLKICSKIAAGERFTVYVVVPMWPEGLPESGSVQAILDWQRRTFEMMYKDVIHALREQGIDEDPRNYLTFFCLGNREVKRSGEYEPTEAPDEDSDYMKAQQARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGSYQPYHLSTHEPARGQVHGFRMALWYEHLGMLDGTFLRPESEECVSKVNRMADKYWDLYSSEALERDLPGHLLRYPVGISSEGNVTELPGCEFFPDTKARVLGTKSDYLPPILTT | 812 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5807850 | 5811537 | - | Sed0016480.1 | Sed07g0780 | 719644 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g0780 | 812 | SMART | C2_3c | 35 | 128 | IPR000008 | - | |
Sed07g0780 | 812 | CDD | C2_plant_PLD | 6 | 152 | - | - | |
Sed07g0780 | 812 | PANTHER | PHOSPHOLIPASE D | 41 | 799 | IPR015679 | GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER) | |
Sed07g0780 | 812 | PIRSF | PLD_plant | 1 | 812 | IPR011402 | GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro) | |
Sed07g0780 | 812 | Gene3D | Endonuclease Chain A | 483 | 701 | - | - | |
Sed07g0780 | 812 | Gene3D | C2 domain | 6 | 160 | IPR035892 | - | |
Sed07g0780 | 812 | SMART | pld_4 | 658 | 685 | IPR001736 | GO:0003824(InterPro) | |
Sed07g0780 | 812 | SMART | pld_4 | 330 | 368 | IPR001736 | GO:0003824(InterPro) | |
Sed07g0780 | 812 | SUPERFAMILY | Phospholipase D/nuclease | 155 | 449 | - | - | |
Sed07g0780 | 812 | CDD | PLDc_pPLDalpha_2 | 496 | 705 | - | - | |
Sed07g0780 | 812 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 330 | 368 | IPR001736 | GO:0003824(InterPro) | |
Sed07g0780 | 812 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 154 | IPR035892 | - | |
Sed07g0780 | 812 | SUPERFAMILY | Phospholipase D/nuclease | 452 | 741 | - | - | |
Sed07g0780 | 812 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 658 | 685 | IPR001736 | GO:0003824(InterPro) | |
Sed07g0780 | 812 | Gene3D | Endonuclease Chain A | 204 | 447 | - | - | |
Sed07g0780 | 812 | Pfam | Phospholipase D C terminal | 732 | 802 | IPR024632 | - | |
Sed07g0780 | 812 | FunFam | Phospholipase D delta | 205 | 448 | - | - | |
Sed07g0780 | 812 | ProSiteProfiles | C2 domain profile. | 1 | 129 | IPR000008 | - | |
Sed07g0780 | 812 | FunFam | Phospholipase D | 471 | 704 | - | - | |
Sed07g0780 | 812 | Pfam | C2 domain | 39 | 130 | IPR000008 | - | |
Sed07g0780 | 812 | Pfam | Phospholipase D Active site motif | 331 | 368 | IPR001736 | GO:0003824(InterPro) | |
Sed07g0780 | 812 | Pfam | Phospholipase D Active site motif | 660 | 685 | IPR001736 | GO:0003824(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed06g2216 | Sed-Chr6:45828442 | Sed07g0780 | Sed-Chr7:5807850 | 1.70E-165 | dispersed | |
Sed07g0780 | Sed-Chr7:5807850 | Sed09g0096 | Sed-Chr9:718036 | 4.00E-200 | dispersed | |
Sed03g1669 | Sed-Chr3:10783572 | Sed07g0780 | Sed-Chr7:5807850 | 6.00E-191 | wgd | |
Sed05g1449 | Sed-Chr5:28237338 | Sed07g0780 | Sed-Chr7:5807850 | 0.00E+00 | wgd | |
Sed07g0780 | Sed-Chr7:5807850 | Sed09g1494 | Sed-Chr9:38679941 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g0780 | K01115 | - | csv:101206113 | 1543.87 |