Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0813 ATGGCTTCCGATTCTCATGCCGGTCTTCTCTGTAATGCTGGAGCCGGTGCTGCTGCTGGAGCTCTTGCTGCTACGTTCGTGTGCCCTTTGGATGTTATCAAGACTAGATTTCAGGTTCATGGACTGCCAAATTTTGGAAAAGCTACGATTTTTTTCTTTTTCTTTACTGGGAGTCTTATAGTTGGCTGTCTGAAACAAATTGCTCATAAAGAGGGGCTGCGTGGAATGTATCGAGGACTCTCGCCTACTGTGATTGCTTTACTTCCTAACTGGGCTGTTTATTTCACAATCTATGGTCAGCTTAAAAGTTTGCTTGGCTCTGAGGATGAAAGTCATCAGCTTTCAATAGGTGCTAATGTGTTGGCCGCTTTTGGTGCTGGGGCTGCTACAACTATTGCAACCGACCCTCTATGGGTAGTTAAGACCAGACTTCACTTGAGGATCTCAAAAAACACAGTGTCTGCCTTGAGGAGAATAGCCTATGAAGAAGGCATCCGTGGATTGTACAGTGGTCTTGTGCCTGCTTTGGCTGGTGTAAGTCACATCACGATTCAGTTTCCAACTTATGAGAAAATAAAAAGTTATTTGGCTAGCAGAGATAATACGATGACCGATAAACTCATGGCACGTGATGTGGCGGTTGCTTCATCTGTCTCCAAGATATTTGCTTCCACATTGACGTATCCACACGAGGTTGGATTCATCTTGCTGGTTGTACGTTCCAGGCTTCAGGAACAAGGGTTCCACTCCGAGAAGTGTTATTCTGGCACGGTCTTTTCGGTTTCAATCGAGGGTGCGCAACCAACCTTCTCTGGACGACACCTGGAGCGGTTATTGTTTACCATCTTTGAGATGATTCACCGTTTTCTTGTCCACTTATTTCCACCGGATCTACATCGACACACATTATGA 912 45.29 MASDSHAGLLCNAGAGAAAGALAATFVCPLDVIKTRFQVHGLPNFGKATIFFFFFTGSLIVGCLKQIAHKEGLRGMYRGLSPTVIALLPNWAVYFTIYGQLKSLLGSEDESHQLSIGANVLAAFGAGAATTIATDPLWVVKTRLHLRISKNTVSALRRIAYEEGIRGLYSGLVPALAGVSHITIQFPTYEKIKSYLASRDNTMTDKLMARDVAVASSVSKIFASTLTYPHEVGFILLVVRSRLQEQGFHSEKCYSGTVFSVSIEGAQPTFSGRHLERLLFTIFEMIHRFLVHLFPPDLHRHTL 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6006815 6010879 - Sed0002837.1 Sed07g0813 719677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0813 303 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 8 258 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(InterPro)|GO:0055085(PANTHER)
Sed07g0813 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 114 195 IPR018108 -
Sed07g0813 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 7 104 IPR018108 -
Sed07g0813 303 SUPERFAMILY Mitochondrial carrier 8 254 IPR023395 -
Sed07g0813 303 Pfam Mitochondrial carrier protein 9 107 IPR018108 -
Sed07g0813 303 Pfam Mitochondrial carrier protein 113 198 IPR018108 -
Sed07g0813 303 Gene3D Mitochondrial carrier domain 9 290 IPR023395 -
Sed07g0813 303 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 1 111 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0813 Sed-Chr7:6006815 Sed09g0236 Sed-Chr9:1850524 1.50E-11 dispersed
Sed07g0557 Sed-Chr7:4209566 Sed07g0813 Sed-Chr7:6006815 5.40E-126 transposed
Sed06g2154 Sed-Chr6:45337744 Sed07g0813 Sed-Chr7:6006815 5.00E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0813 K15115 - csv:101204681 370.548