Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g0813 | ATGGCTTCCGATTCTCATGCCGGTCTTCTCTGTAATGCTGGAGCCGGTGCTGCTGCTGGAGCTCTTGCTGCTACGTTCGTGTGCCCTTTGGATGTTATCAAGACTAGATTTCAGGTTCATGGACTGCCAAATTTTGGAAAAGCTACGATTTTTTTCTTTTTCTTTACTGGGAGTCTTATAGTTGGCTGTCTGAAACAAATTGCTCATAAAGAGGGGCTGCGTGGAATGTATCGAGGACTCTCGCCTACTGTGATTGCTTTACTTCCTAACTGGGCTGTTTATTTCACAATCTATGGTCAGCTTAAAAGTTTGCTTGGCTCTGAGGATGAAAGTCATCAGCTTTCAATAGGTGCTAATGTGTTGGCCGCTTTTGGTGCTGGGGCTGCTACAACTATTGCAACCGACCCTCTATGGGTAGTTAAGACCAGACTTCACTTGAGGATCTCAAAAAACACAGTGTCTGCCTTGAGGAGAATAGCCTATGAAGAAGGCATCCGTGGATTGTACAGTGGTCTTGTGCCTGCTTTGGCTGGTGTAAGTCACATCACGATTCAGTTTCCAACTTATGAGAAAATAAAAAGTTATTTGGCTAGCAGAGATAATACGATGACCGATAAACTCATGGCACGTGATGTGGCGGTTGCTTCATCTGTCTCCAAGATATTTGCTTCCACATTGACGTATCCACACGAGGTTGGATTCATCTTGCTGGTTGTACGTTCCAGGCTTCAGGAACAAGGGTTCCACTCCGAGAAGTGTTATTCTGGCACGGTCTTTTCGGTTTCAATCGAGGGTGCGCAACCAACCTTCTCTGGACGACACCTGGAGCGGTTATTGTTTACCATCTTTGAGATGATTCACCGTTTTCTTGTCCACTTATTTCCACCGGATCTACATCGACACACATTATGA | 912 | 45.29 | MASDSHAGLLCNAGAGAAAGALAATFVCPLDVIKTRFQVHGLPNFGKATIFFFFFTGSLIVGCLKQIAHKEGLRGMYRGLSPTVIALLPNWAVYFTIYGQLKSLLGSEDESHQLSIGANVLAAFGAGAATTIATDPLWVVKTRLHLRISKNTVSALRRIAYEEGIRGLYSGLVPALAGVSHITIQFPTYEKIKSYLASRDNTMTDKLMARDVAVASSVSKIFASTLTYPHEVGFILLVVRSRLQEQGFHSEKCYSGTVFSVSIEGAQPTFSGRHLERLLFTIFEMIHRFLVHLFPPDLHRHTL | 303 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6006815 | 6010879 | - | Sed0002837.1 | Sed07g0813 | 719677 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g0813 | 303 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 8 | 258 | IPR044712 | GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(InterPro)|GO:0055085(PANTHER) | |
Sed07g0813 | 303 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 114 | 195 | IPR018108 | - | |
Sed07g0813 | 303 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 7 | 104 | IPR018108 | - | |
Sed07g0813 | 303 | SUPERFAMILY | Mitochondrial carrier | 8 | 254 | IPR023395 | - | |
Sed07g0813 | 303 | Pfam | Mitochondrial carrier protein | 9 | 107 | IPR018108 | - | |
Sed07g0813 | 303 | Pfam | Mitochondrial carrier protein | 113 | 198 | IPR018108 | - | |
Sed07g0813 | 303 | Gene3D | Mitochondrial carrier domain | 9 | 290 | IPR023395 | - | |
Sed07g0813 | 303 | FunFam | Nicotinamide adenine dinucleotide transporter 1, chloroplastic | 1 | 111 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g0813 | Sed-Chr7:6006815 | Sed09g0236 | Sed-Chr9:1850524 | 1.50E-11 | dispersed | |
Sed07g0557 | Sed-Chr7:4209566 | Sed07g0813 | Sed-Chr7:6006815 | 5.40E-126 | transposed | |
Sed06g2154 | Sed-Chr6:45337744 | Sed07g0813 | Sed-Chr7:6006815 | 5.00E-10 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g0813 | K15115 | - | csv:101204681 | 370.548 |