Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g0840 | ATGTGCGATCTCGAAACTATGGCTAAGACCAAGAATGTTCGCCAGAGACGGATGAGAGTTCCTAAACTGAGGTACAAAGTACACGCTGCGGCGGAAGGTGATCGGGACAGCGAGTTAACCGAAAATGTCGCTTCGGATTCGAGTGGTGATCGAGTTCTAACCTCTGAGAAGGAAGCGATTTCTGTGTTTGATTTTGATTGTGGATTGTACAGCGAGATTTCGATTATAGGGCGGAGGAAGGAGATGGAAGACGAAGTGAGAGTGGAATTGGGATTGACGGCGATGAACGATGAGAAGTACGATTTCTTCGCCGTGTACGACGGCCACGGCGGCGCGCAGGTGGCGCAACTGTGCCGTGAGCGGTTGCACCGGATTGTGGCGGAGGAGATTGTGGATCGAGGGGAGATTGATGCGGCGGAGTGGGGAAGGTTGATGGAGAGGTGCTTTGAGAGAATGGACGATGAAGTGATTAGCGGCGTCGCCGTGATGAAGACGGTCGGCTCGGCGGTGGTTGCGGTGGTTGCCGGAAAAGATGAGGTGGTGGTGGCCAATTGCGGCGATTGTCGAGCCGTTTTGGCTAGGGCTGGAATTTCCTTGCCCTTGTCTGACGATCATAAGCCTGGCAGAGCTGATGAGTTGAAGAGAATCGAATCTGCCGGTGGGCGGGTCATAAACTGGAATGGATACCGGGTGCTAGGAGTTCTTGCCACTTCGAGATCGATCGGCGATGAATATCTTAAACCATTTGTTATCTCCAAACCAGAAGTTACTGTGACCAAGCGAACCGACCAAGACGAGTTCCTCATACTAGGAAGTGATGGTTTGTGGGATGTCGTTTCAAACGAAATTGCCTGCAATGTAGTGAGGAGATGTTTCAGAGGAAAAATGAAGAGGATCTCCCTAAAGGTGGCGAATGACAGCCATGTTGCCGAAGCTGCAGCAGTGTTGGCTGAGCTCGCCGTGGCTCGTGGAAGCAAGGACAACATCAGTGTAATAGTAGTAGATTTGAGGAAATTACCAAACAATTCCTCTCCATGA | 1038 | 51.16 | MCDLETMAKTKNVRQRRMRVPKLRYKVHAAAEGDRDSELTENVASDSSGDRVLTSEKEAISVFDFDCGLYSEISIIGRRKEMEDEVRVELGLTAMNDEKYDFFAVYDGHGGAQVAQLCRERLHRIVAEEIVDRGEIDAAEWGRLMERCFERMDDEVISGVAVMKTVGSAVVAVVAGKDEVVVANCGDCRAVLARAGISLPLSDDHKPGRADELKRIESAGGRVINWNGYRVLGVLATSRSIGDEYLKPFVISKPEVTVTKRTDQDEFLILGSDGLWDVVSNEIACNVVRRCFRGKMKRISLKVANDSHVAEAAAVLAELAVARGSKDNISVIVVDLRKLPNNSSP | 345 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6130534 | 6132952 | - | Sed0015278.1 | Sed07g0840 | 719704 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g0840 | 345 | FunFam | Protein phosphatase 2C 50 | 76 | 342 | - | - | |
Sed07g0840 | 345 | PANTHER | PROTEIN PHOSPHATASE | 44 | 335 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Sed07g0840 | 345 | CDD | PP2Cc | 70 | 336 | IPR001932 | - | |
Sed07g0840 | 345 | Gene3D | - | 66 | 341 | IPR036457 | - | |
Sed07g0840 | 345 | Pfam | Protein phosphatase 2C | 74 | 329 | IPR001932 | - | |
Sed07g0840 | 345 | SUPERFAMILY | PP2C-like | 70 | 339 | IPR036457 | - | |
Sed07g0840 | 345 | ProSiteProfiles | PPM-type phosphatase domain profile. | 69 | 336 | IPR001932 | - | |
Sed07g0840 | 345 | ProSitePatterns | PPM-type phosphatase domain signature. | 102 | 110 | IPR000222 | GO:0043169(InterPro) | |
Sed07g0840 | 345 | SMART | PP2C_4 | 56 | 334 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g0755 | Sed-Chr3:4558600 | Sed07g0840 | Sed-Chr7:6130534 | 6.30E-31 | dispersed | |
Sed07g0840 | Sed-Chr7:6130534 | Sed11g2210 | Sed-Chr11:35695923 | 1.70E-64 | dispersed | |
Sed07g0840 | Sed-Chr7:6130534 | Sed07g0841 | Sed-Chr7:6130534 | 2.50E-111 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g0840 | K14497 | - | csv:101214188 | 507.679 |