Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g0886 | ATGGGAGAGGAAGTGAAGCTGTTGGATTGTTGGGCAAGCATGTTTGGGATGCGAGTCAGGGTAGCCCTAGCGATGAAGGGCGTGCCCTACCAAAATGTGGAACAAGATCTGATGAACAAGAGCCCTTTGCTTCTCCAAATGAACCCACTTCACAAAAAGGTCCCTGTTCTTGTTCATAATGGAAAACCCATTTGTGAATCTTCCATTATTGTTCAATACATAGATGAAATCTGGAAGGACAAGGCTCCTCCTCTCTTGCCCTCTGATCCTTATGATAGAGCTCAGGCTAAGTTCTGGGTTGATTTCATTGACAAAAAGCTTTATGATGCTACAAAGAAGATATGGGGGAGCAAGGGAGAGGAACATGAGGCAGGGAAGAAGGAGATGATAGCAATTTTGAAGCAATTGGAAGAAGTGATTGGGGACAAAGCTTACTTTGGAGGTGAGTGTTTGGGATTTGTTGACATTGCTTTGATTGGATTCTATGCTTGGTTTTATAGCTATGAAACCATTGGAAACTTTAGCATTGAGGCTGAGTGTCCCAAGACAATGGATTGGGCCAAGAGATGCTTGCAAAATGAGAGTGTTTCTAAGTCCTTGCCTGACCCCAAGAAGGTCTATGACTTTATGCTTCAAGTCAAGAAAGTGCTTGGCCTTGACTAG | 663 | 43.59 | MGEEVKLLDCWASMFGMRVRVALAMKGVPYQNVEQDLMNKSPLLLQMNPLHKKVPVLVHNGKPICESSIIVQYIDEIWKDKAPPLLPSDPYDRAQAKFWVDFIDKKLYDATKKIWGSKGEEHEAGKKEMIAILKQLEEVIGDKAYFGGECLGFVDIALIGFYAWFYSYETIGNFSIEAECPKTMDWAKRCLQNESVSKSLPDPKKVYDFMLQVKKVLGLD | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6394236 | 6396699 | + | Sed0001086.1 | Sed07g0886 | 719750 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g0886 | 220 | Gene3D | - | 89 | 220 | - | - | |
Sed07g0886 | 220 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
Sed07g0886 | 220 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 209 | IPR010987 | - | |
Sed07g0886 | 220 | SUPERFAMILY | GST C-terminal domain-like | 76 | 215 | IPR036282 | - | |
Sed07g0886 | 220 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 210 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Sed07g0886 | 220 | FunFam | Tau class glutathione S-transferase | 1 | 86 | - | - | |
Sed07g0886 | 220 | SFLD | Main.3: Omega- and Tau-like | 2 | 217 | IPR045073 | - | |
Sed07g0886 | 220 | FunFam | Glutathione S-transferase U20 | 89 | 220 | - | - | |
Sed07g0886 | 220 | Gene3D | Glutaredoxin | 1 | 88 | - | - | |
Sed07g0886 | 220 | CDD | GST_C_Tau | 90 | 212 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Sed07g0886 | 220 | Pfam | Glutathione S-transferase, C-terminal domain | 118 | 192 | IPR004046 | - | |
Sed07g0886 | 220 | SUPERFAMILY | Thioredoxin-like | 5 | 108 | IPR036249 | - | |
Sed07g0886 | 220 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Sed07g0886 | 220 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Sed07g0886 | 220 | SFLD | Main (cytGST) | 2 | 217 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g0886 | Sed-Chr7:6394236 | Sed13g0673 | Sed-Chr13:4642427 | 1.10E-80 | dispersed | |
Sed07g0886 | Sed-Chr7:6394236 | Sed07g0887 | Sed-Chr7:6397936 | 3.30E-93 | tandem | |
Sed03g0911 | Sed-Chr3:5617202 | Sed07g0886 | Sed-Chr7:6394236 | 1.30E-65 | transposed | |
Sed06g0723 | Sed-Chr6:7071607 | Sed07g0886 | Sed-Chr7:6394236 | 2.60E-37 | transposed | |
Sed13g0672 | Sed-Chr13:4630270 | Sed07g0886 | Sed-Chr7:6394236 | 2.40E-87 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g0886 | K00799 | - | csv:101217848 | 369.392 |