Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g0887 | ATGGGTGAAGAAGTGAAACTGTTGGATTTTTGGGCAAGCATGTTTGGGATGAGAGTCAGGGTAGCCCTTGCCCTGAAGGGTGTGCCCTACGAATATGTGGATGAAGATCTCAGGAACAAGAGCCCTTTGCTTCTCCAAATGAACCCACTTCACAAAAAGATCCCTGTTCTCATTCATAATGGAAAACCCATTTGTGAATCTTCCATTATTGTTCAATACATTGATGAAATCTGGAAGGACAAAGCTCCTCTCTTGCCTTCTCATCCTTACGAGAGGGCTCAGGCCAGGTTTTGGGTGGATTTCATTGACAAAAAGCTTTTTGATGCTGGGAGGAAGATTTGGGCAACCAAGGGAGTGGAGCAAGAAGAAGGCAAGAAGGGCTTTATAGGAATTTTAAAGCAACTTGAAGAAGTTCTTGGAGATAAGGCTTACTTTGGAGGTGAGTGTTTGGATATTTTAGACATTGTTTTGATTGGATACTACACTTGGTTTTATAGCTATGAATCTATTGGGAACTTCAGCATTGAGGCTGAGTGTCCCAACATAATGGCTTGGGCTAAGAGATGCTTGCAAAATGACACTGTTTCCAACCCTTTTGCCATAAGGGTGAGAGTGGCTTTGGCAGAAAAGGGGATAAAGTATGAGGCAAAAGAGGAAGATTTGAGCAACAAAAGCCCTTTGCTTTTGGAGATGAACCCTTTGTACAAACAAGTCCCTGTTTTGATTCACAAAGGAAACCCCATTATTGAGTCTCTTATCATAATTGAATATATTGATGAGACTTGGAGTGGTGATCATGGAGCTTACCCTAATTTGCTTCCTTCTCATCCTTATGAGAGATCCCATGCTAGGTTTTGGGCTGACTATGTGGAAAAGAAGATTTATCCAATTGGAGGTAAGCTATGGTACAATGGAGAGAAGCCAGAAGAGGAGAGAGAAGCAATTGGAAAGGAACTATTGGTGAGCTTTAAGCAGCTAGAAGAAGAGCTTGGAGAAAAGGAATATTTTGGGGGCCAAACATTTGGGCTCATAGATATTGCTCTAATTCCATTTTACTCCATGTTTCTTGCATTCAAATTGGTTGGAAAATTGGACTTGGAAGTTGAATGTCCCAACATCTTACAATGGGCTAAGAGGTGCCTCCAAAGAGAGAGTGTCTCAAAGAATATGCCTACTCAACAAGAGGTTTACGATGTCAACCGACCTTTTTGTGTCTCTAAATTAAATGATATCTCTGCAGAAAACAGCCTTTTACCAAATAAAAAGATGTGA | 1272 | 41.04 | MGEEVKLLDFWASMFGMRVRVALALKGVPYEYVDEDLRNKSPLLLQMNPLHKKIPVLIHNGKPICESSIIVQYIDEIWKDKAPLLPSHPYERAQARFWVDFIDKKLFDAGRKIWATKGVEQEEGKKGFIGILKQLEEVLGDKAYFGGECLDILDIVLIGYYTWFYSYESIGNFSIEAECPNIMAWAKRCLQNDTVSNPFAIRVRVALAEKGIKYEAKEEDLSNKSPLLLEMNPLYKQVPVLIHKGNPIIESLIIIEYIDETWSGDHGAYPNLLPSHPYERSHARFWADYVEKKIYPIGGKLWYNGEKPEEEREAIGKELLVSFKQLEEELGEKEYFGGQTFGLIDIALIPFYSMFLAFKLVGKLDLEVECPNILQWAKRCLQRESVSKNMPTQQEVYDVNRPFCVSKLNDISAENSLLPNKKM | 423 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6397936 | 6405288 | + | Sed0020168.1 | Sed07g0887 | 719751 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g0887 | 423 | Gene3D | - | 87 | 194 | - | - | |
Sed07g0887 | 423 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 276 | 403 | IPR010987 | - | |
Sed07g0887 | 423 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 187 | 266 | IPR004045 | - | |
Sed07g0887 | 423 | Pfam | Glutathione S-transferase, C-terminal domain | 291 | 384 | IPR004046 | - | |
Sed07g0887 | 423 | SFLD | Main (cytGST) | 2 | 196 | - | - | |
Sed07g0887 | 423 | SUPERFAMILY | GST C-terminal domain-like | 260 | 400 | IPR036282 | - | |
Sed07g0887 | 423 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Sed07g0887 | 423 | FunFam | Tau class glutathione S-transferase | 1 | 87 | - | - | |
Sed07g0887 | 423 | CDD | GST_N_Tau | 198 | 262 | - | - | |
Sed07g0887 | 423 | SUPERFAMILY | GST C-terminal domain-like | 76 | 197 | IPR036282 | - | |
Sed07g0887 | 423 | CDD | GST_C_Tau | 277 | 401 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Sed07g0887 | 423 | CDD | GST_C_Tau | 89 | 195 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Sed07g0887 | 423 | SFLD | Glutathione Transferase (cytosolic) | 196 | 398 | IPR040079 | - | |
Sed07g0887 | 423 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 227 | IPR010987 | - | |
Sed07g0887 | 423 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
Sed07g0887 | 423 | Pfam | Glutathione S-transferase, N-terminal domain | 195 | 260 | IPR004045 | - | |
Sed07g0887 | 423 | SUPERFAMILY | Thioredoxin-like | 197 | 295 | IPR036249 | - | |
Sed07g0887 | 423 | Pfam | Glutathione S-transferase, C-terminal domain | 122 | 188 | - | - | |
Sed07g0887 | 423 | SUPERFAMILY | Thioredoxin-like | 5 | 106 | IPR036249 | - | |
Sed07g0887 | 423 | Gene3D | Glutaredoxin | 195 | 275 | - | - | |
Sed07g0887 | 423 | Gene3D | Glutaredoxin | 1 | 86 | - | - | |
Sed07g0887 | 423 | SFLD | Main.3: Omega- and Tau-like | 2 | 196 | IPR045073 | - | |
Sed07g0887 | 423 | SFLD | Main.3: Omega- and Tau-like | 196 | 398 | IPR045073 | - | |
Sed07g0887 | 423 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Sed07g0887 | 423 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 195 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Sed07g0887 | 423 | Gene3D | - | 276 | 405 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g0911 | Sed-Chr3:5617202 | Sed07g0887 | Sed-Chr7:6397936 | 2.20E-60 | dispersed | |
Sed07g0887 | Sed-Chr7:6397936 | Sed13g0672 | Sed-Chr13:4630270 | 4.20E-153 | dispersed | |
Sed07g0886 | Sed-Chr7:6394236 | Sed07g0887 | Sed-Chr7:6397936 | 3.30E-93 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g0887 | K00799 | - | csv:101217848 | 358.607 |