Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0937 ATGTTAGAAAATAAACTTCGCCCATTCGATTCGCCATTCATACCTGACTTTTCCATCCTTCACCTTTCTGGTTTGAGGAAGAAGATGGCTTGTGAAAACTTTGGTTTATGGCTATTTTTTGTTGCTTCTTTACATTTTTTCATGAAAACAAAGTGTCTTAATGTGGGGATTACTTATGTTCAAGATGCTGCTCTTATGGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTGAGCAACGGGTTTGGCGCTGGGATCGACAATTGGTTGATTCAACTCGAGGGAGGGGGATGGTGCAACAATGTCACAACTTGCCTCCAACGCAAGGGCACTCGTTTAGGTTCATCTCGGGAAATGCTCCCCGAGCTTGCGTTCTCGGCAATTTTGAGTGATAAACCACAGTTCAATCCAGATTTTTATAACTGGAACAGAATTAAGGTTCGGTACTGTGATGGATCTTCTTTCACTGGAGATGTTGAAGCTGTTGATCCCGTTACTAATTTGCATTTCAGAGGAGCAAGAATCTTTCGTGCTGTTATCGATAGCCTACTCGCCGAGGGAATGCAAAATGCAAAAAATGCTATTCTCTCGGGTTGTTCAGCGGGTGGATTAAGTTCCATTTTGCAGTGTGATAACTTCAGGTCTCTACTTCCTCCAACTACTAAAGTAAGGTGCCTCTCAGATGCAGGCTACTTTATCAATGTGAAAGATGTCTCAGGAGCTCATCATATCAAAGACTTCTTTAGCGACATTGTTACCCTTCATGGTTCTGCTGGGAATTTGCCTGTATCATGCACTTCGAAAATGAAACCCGAGATGTGTTTCTTTCCCCAAAATGTGGTTCAGCTCATTCAAACTCCAATCTTTCTTGTAAATGCAGCTTATGATTCATGGCAGATAAAGAATATTCTGGCTCCCGGTGTTGCCGATCCACACGGTACTTGGCACGACTGCAAGCTTGACATAAAAAACTGCTCGCCTATTCAGCTTCGAATAATGCAAGATTTCAGGGTTCAGTTTTTGAGTGCATTGAGTGGCATTGGAAGATCTTCATCAAGAGGGTTGTTCATAGATTCTTGCTATGCCCATTGCCAAACTGAAATGCAGGAGATGTGGTTTAGAGCGGACTCGCCAATGCTGAGTAAGACGCCCATTGCAAAGGCAGTTGGAGACTGGTTTTATGACAGGACTCCATTCCAGAAGATCGACTGTCCGTATCCGTGCAACCCAACGTGCCACAACCGCATTTTCGAAATGTAA 1266 43.52 MLENKLRPFDSPFIPDFSILHLSGLRKKMACENFGLWLFFVASLHFFMKTKCLNVGITYVQDAALMGAVCLDGSPPAYHLSNGFGAGIDNWLIQLEGGGWCNNVTTCLQRKGTRLGSSREMLPELAFSAILSDKPQFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPVTNLHFRGARIFRAVIDSLLAEGMQNAKNAILSGCSAGGLSSILQCDNFRSLLPPTTKVRCLSDAGYFINVKDVSGAHHIKDFFSDIVTLHGSAGNLPVSCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHDCKLDIKNCSPIQLRIMQDFRVQFLSALSGIGRSSSRGLFIDSCYAHCQTEMQEMWFRADSPMLSKTPIAKAVGDWFYDRTPFQKIDCPYPCNPTCHNRIFEM 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6851108 6855043 - Sed0016330.1 Sed07g0937 719801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0937 421 PANTHER NOTUM-RELATED 43 416 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Sed07g0937 421 Pfam Pectinacetylesterase 50 399 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0384 Sed-Chr4:2750428 Sed07g0937 Sed-Chr7:6851108 3.80E-96 dispersed
Sed04g0385 Sed-Chr4:2750428 Sed07g0937 Sed-Chr7:6851108 4.80E-103 dispersed
Sed07g0937 Sed-Chr7:6851108 Sed07g0939 Sed-Chr7:6851108 4.40E-243 dispersed
Sed07g0936 Sed-Chr7:6837442 Sed07g0937 Sed-Chr7:6851108 9.40E-170 tandem
Sed07g0937 Sed-Chr7:6851108 Sed07g0938 Sed-Chr7:6851108 5.50E-254 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0937 K19882 - csv:101214431 724.546