Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0938 ATGTTAGAAAATAAACTTCGCCCATTCGATTCGCCATTCATACCTGACTTTTCCATCCTTCACCTTTCTGGTTTGAGGAAGAAGATGGCTTGTGAAAACTTTGGTTTATGGCTATTTTTTGTTGCTTCTTTACATTTTTTCATGAAAACAAAGTGTCTTAATGTGGGGATTACTTATGTTCAAGATGCTGCTCTTATGGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTGAGCAACGGGTTTGGCGCTGGGATCGACAATTGGTTGATTCAACTCGAGGGAGGGGGATGGTGCAACAATGTCACAACTTGCCTCCAACGCAAGGGCACTCGTTTAGGTTCATCTCGGGAAATGCTCCCCGAGCTTGCGTTCTCGGCAATTTTGAGTGATAAACCACAGTTCAATCCAGATTTTTATAACTGGAACAGAATTAAGGTTCGGTACTGTGATGGATCTTCTTTCACTGGAGATGTTGAAGCTGTTGATCCCGTTACTAATTTGCATTTCAGAGGAGCAAGAATCTTTCGTGCTGTTATCGATAGCCTACTCGCCGAGGGAATGCAAAATGCAAAAAATGCTATTCTCTCGGGTTGTTCAGCGGGTGGATTAAGTTCCATTTTGCAGTGTGATAACTTCAGGTCTCTACTTCCTCCAACTACTAAAGTAAGGTGCCTCTCAGATGCAGGCTACTTTATCAATGTGAAAGATGTCTCAGGAGCTCATCATATCAAAGACTTCTTTAGCGACATTGTTACCCTTCATGGTTCTGCTGGGAATTTGCCTGTATCATGCACTTCGAAAATGAAACCCGAGATGTGTTTCTTTCCCCAAAATGTGGTTCAGCTCATTCAAACTCCAATCTTTCTTGTAAATGCAGCTTATGATTCATGGCAGATAAAGAATATTCTGGCTCCCGGTGTTGCCGATCCACACGGTACTTGGCACGACTGCAAGCTTGACATAAAAAACTGCTCGCCTATTCAGCTTCGAATAATGCAAGATTTCAGGGTTCAGTTTTTGAGTGCATTGAGTGGCATTGGAAGATCTTCATCAAGAGGGTTGTTCATAGATTCTTGCTATGCCCATTGCCAAACTGAAATGCAGGAGATGTGGTTTAGAGCGGACTCGCCAATGCTGAGTAAGACGGTAAGCAGCAGTTATCGGTCGACGACATCGAAAACATGTTGTTTCCTTACCAACTCTATTTTATTTTTATCAATTTTGAAAATGCAGCCCATTGCAAAGGCAGTTGGAGACTGGTTTTATGACAGGACTCCATTCCAGAAGATCGACTGTCCGTATCCGTGCAACCCAACGTGCCACAACCGCATTTTCGAAATGTAA 1353 42.94 MLENKLRPFDSPFIPDFSILHLSGLRKKMACENFGLWLFFVASLHFFMKTKCLNVGITYVQDAALMGAVCLDGSPPAYHLSNGFGAGIDNWLIQLEGGGWCNNVTTCLQRKGTRLGSSREMLPELAFSAILSDKPQFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPVTNLHFRGARIFRAVIDSLLAEGMQNAKNAILSGCSAGGLSSILQCDNFRSLLPPTTKVRCLSDAGYFINVKDVSGAHHIKDFFSDIVTLHGSAGNLPVSCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHDCKLDIKNCSPIQLRIMQDFRVQFLSALSGIGRSSSRGLFIDSCYAHCQTEMQEMWFRADSPMLSKTVSSSYRSTTSKTCCFLTNSILFLSILKMQPIAKAVGDWFYDRTPFQKIDCPYPCNPTCHNRIFEM 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6851108 6855043 - Sed0016330.2 Sed07g0938 719802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0938 450 PANTHER NOTUM-RELATED 44 445 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Sed07g0938 450 Pfam Pectinacetylesterase 50 385 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0938 Sed-Chr7:6851108 Sed13g0748 Sed-Chr13:5311932 1.60E-190 dispersed
Sed07g0937 Sed-Chr7:6851108 Sed07g0938 Sed-Chr7:6851108 5.50E-254 tandem
Sed07g0938 Sed-Chr7:6851108 Sed07g0939 Sed-Chr7:6851108 2.70E-238 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0938 K19882 - csv:101214431 709.523