Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0939 ATGGCTTTTGGTTATCTGTGCAGGAAGAAGATGGCTTGTGAAAACTTTGGTTTATGGCTATTTTTTGTTGCTTCTTTACATTTTTTCATGAAAACAAAGTGTCTTAATGTGGGGATTACTTATGTTCAAGATGCTGCTCTTATGGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTGAGCAACGGGTTTGGCGCTGGGATCGACAATTGGTTGATTCAACTCGAGGGAGGGGGATGGTGCAACAATGTCACAACTTGCCTCCAACGCAAGGGCACTCGTTTAGGTTCATCTCGGGAAATGCTCCCCGAGCTTGCGTTCTCGGCAATTTTGAGTGATAAACCACAGTTCAATCCAGATTTTTATAACTGGAACAGAATTAAGGTTCGGTACTGTGATGGATCTTCTTTCACTGGAGATGTTGAAGCTGTTGATCCCGTTACTAATTTGCATTTCAGAGGAGCAAGAATCTTTCGTGCTGTTATCGATAGCCTACTCGCCGAGGGAATGCAAAATGCAAAAAATGCTATTCTCTCGGGTTGTTCAGCGGGTGGATTAAGTTCCATTTTGCAGTGTGATAACTTCAGGTCTCTACTTCCTCCAACTACTAAAGTAAGGTGCCTCTCAGATGCAGGCTACTTTATCAATGTGAAAGATGTCTCAGGAGCTCATCATATCAAAGACTTCTTTAGCGACATTGTTACCCTTCATGGTTCTGCTGGGAATTTGCCTGTATCATGCACTTCGAAAATGAAACCCGAGATGTGTTTCTTTCCCCAAAATGTGGTTCAGCTCATTCAAACTCCAATCTTTCTTGTAAATGCAGCTTATGATTCATGGCAGATAAAGAATATTCTGGCTCCCGGTGTTGCCGATCCACACGGTACTTGGCACGACTGCAAGCTTGACATAAAAAACTGCTCGCCTATTCAGCTTCGAATAATGCAAGATTTCAGGGTTCAGTTTTTGAGTGCATTGAGTGGCATTGGAAGATCTTCATCAAGAGGGTTGTTCATAGATTCTTGCTATGCCCATTGCCAAACTGAAATGCAGGAGATGTGGTTTAGAGCGGACTCGCCAATGCTGAGTAAGACGCCCATTGCAAAGGCAGTTGGAGACTGGTTTTATGACAGGACTCCATTCCAGAAGATCGACTGTCCGTATCCGTGCAACCCAACGTGCCACAACCGCATTTTCGAAATGTAA 1212 43.73 MAFGYLCRKKMACENFGLWLFFVASLHFFMKTKCLNVGITYVQDAALMGAVCLDGSPPAYHLSNGFGAGIDNWLIQLEGGGWCNNVTTCLQRKGTRLGSSREMLPELAFSAILSDKPQFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPVTNLHFRGARIFRAVIDSLLAEGMQNAKNAILSGCSAGGLSSILQCDNFRSLLPPTTKVRCLSDAGYFINVKDVSGAHHIKDFFSDIVTLHGSAGNLPVSCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHDCKLDIKNCSPIQLRIMQDFRVQFLSALSGIGRSSSRGLFIDSCYAHCQTEMQEMWFRADSPMLSKTPIAKAVGDWFYDRTPFQKIDCPYPCNPTCHNRIFEM 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6851108 6854702 - Sed0016330.3 Sed07g0939 719803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0939 403 Pfam Pectinacetylesterase 32 381 IPR004963 GO:0016787(InterPro)
Sed07g0939 403 PANTHER NOTUM-RELATED 26 398 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0936 Sed-Chr7:6837442 Sed07g0939 Sed-Chr7:6851108 9.40E-170 dispersed
Sed07g0937 Sed-Chr7:6851108 Sed07g0939 Sed-Chr7:6851108 4.40E-243 dispersed
Sed07g0939 Sed-Chr7:6851108 Sed13g0748 Sed-Chr13:5311932 2.20E-199 dispersed
Sed07g0938 Sed-Chr7:6851108 Sed07g0939 Sed-Chr7:6851108 2.70E-238 tandem
Sed07g0939 Sed-Chr7:6851108 Sed07g0940 Sed-Chr7:6851108 2.70E-165 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0939 K19882 - csv:101214431 724.546