Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0963 ATGGCCCTCGCGGTGCTCGATGCCCTCGACAATGCTCGAACCCAATGGTACCACATCACGGCAATCGTAATCGCCGGGATGGGCTTCTTCACGGACGCCTACGACCTCTTCTGCATCTCGACCGTGTCAAAGCTCCTCGGTCGACTCTATTACTTCGACCCCACTAGTTCGAAGCCCGGGAAGCTTCCGAATGCGGTGAACAACGCTGTCGTCGGGGTCGCGCTCGTCGGGACGCTATGCGGGCAGCTGTTCTTTGGGTGGTTGGGTGATAAACTTGGGAGGAAAAAAGTTTATGGGGTAACCCTAATTCTGATGGCATTCTGTGCCATTTGCTGTGGGCTTTCCTTTGGGCCCACGTCGAAATCAGTGATTGGTACACTTTGTTTCTTTAGATTTTGGCTTGGATTTGGCATTGGCGGCGATTATCCACTTTCAGCCACAATCATGTCTGAATATGCTAATAAAAAGACTAGAGGAGCATTTATTGCAGCTGTTTTTGCCATGCAGGGTGTGGGGCTTGTCTTTGCAGGTCTAATCACAATGATCCTATCCAAAATCTTCCTCACCATTCACGATGCTCCCTCCTACAAAAGCAACCCAATATTTTCCACTCAACCTCAAGGAGACTTCCTATGGCGGATTGTGTTGATGCTTGGTGCTTTACCAGCCATTTTAACCTACTATTGGCGTATGAAAATGCCCGAGACCGGCCGATACACTGCCCTCATCGAAGGCAACGCAAAGCAAGCCGCTGCGGACATGGGCAAGGTCTTGGAGATCCAAATCCAAGCTGATCAAGAAAAGCTTTCAAATTTCAAATCCAACAATGAATATGGCTTGCTCTCTAAAGAGTTTTTCAATCGCCATGGACTCCATTTGATTGGCACCACCACCACCTGGTTCTTGTTGGACATTGCCTTTTATAGCAATAACCTAACTCAAAAGGACATCTTCCCAGCCATGAACTTGACCAAAAAGGCTGAAGAGGTCAATGCCTTGGAAGAGGTTTATGAAACTTCCAAGGCTATGTTTCTTATCGCCTTGCTCGGTACTTTTCCTGGATACTGGTTCACCGTCTTTCTCATCGAGAAGCTCGGACGGTTCAAAATCCAGTTGATGGGATTCTTCATGATGTCCCTTTTCATGGCTATCCTCGGCATTCGTTACAACTATATGAAGAATCATCCCGCGGTTTTCGCCATTGTGTATGGCTTGACGTTCTTTTTTGCCAACTTTGGACCGAATAGCACCACGTTTGTCCTTCCGGCTGAGTTGTTCCCAACAAGGGTTCGGTCGACATGCCATGCGTTGAGTGCGGCGTCTGGGAAGGCCGGTGCCATCGTTGGAGCTTTTGGGGTGCAAAACTATACGTTGGATGGTAGTGCTAGTAAGATTCAAAAGGCTATGATTTTCTTGGCTTTTACCAACATGCTAGGGTTTGTGTTTACATTCTTGGTGACCGAAACGAAAGGGCGGTCGTTGGAGGAGATCTCCGGTGAGGATAGCGGAGGCGGCGAAAATGAAACTCATGGCCAGTGA 1539 48.41 MALAVLDALDNARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPTSSKPGKLPNAVNNAVVGVALVGTLCGQLFFGWLGDKLGRKKVYGVTLILMAFCAICCGLSFGPTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGLVFAGLITMILSKIFLTIHDAPSYKSNPIFSTQPQGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEIQIQADQEKLSNFKSNNEYGLLSKEFFNRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTKKAEEVNALEEVYETSKAMFLIALLGTFPGYWFTVFLIEKLGRFKIQLMGFFMMSLFMAILGIRYNYMKNHPAVFAIVYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGSASKIQKAMIFLAFTNMLGFVFTFLVTETKGRSLEEISGEDSGGGENETHGQ 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7038812 7041430 + Sed0018135.1 Sed07g0963 719827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0963 512 FunFam Inorganic phosphate transporter 1-6 17 510 - -
Sed07g0963 512 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857(InterPro)
Sed07g0963 512 Pfam Sugar (and other) transporter 23 498 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Sed07g0963 512 CDD MFS_PhT 22 490 - -
Sed07g0963 512 Gene3D MFS general substrate transporter like domains 17 511 IPR036259 -
Sed07g0963 512 NCBIfam phosphate:H+ symporter 6 500 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Sed07g0963 512 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 496 - -
Sed07g0963 512 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0963 Sed-Chr7:7038812 Sed12g1032 Sed-Chr12:6680763 8.60E-185 dispersed
Sed13g0089 Sed-Chr13:566724 Sed07g0963 Sed-Chr7:7038812 1.20E-279 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0963 K08176 - csv:101210631 926.776