Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0990 ATGGCGGCCGGCCTCTCCTCCGCCGCCGTATCGCCCAAACCATTCCGCCACCTCTTCCTCCTTCCCTCCAATCTCTCCCCTAAACCTCCGGCTCCCTTTCTCTTTCCGCCGTCCGCCCTCCGGAACAGTAGAATCCGATGGAATCTCCGGCGAAAAACGCTGCTCACCGTCTGCGTGCTCCTCGGCGATCAGAACAGCTCCGGCGAGGTGGAGAGCCTCTCGGACGAAGAATCGCCGATTGTAGTCCCTCAGATCCCGCCGCCTCGCGTTGCGGAGAGATTGGCGAGGAAGAAATCGGAGCGATCTACTTATCTCATCGCGGCGGTTATGTCTAGCTTTGGAATTACTTCCATGGCCGTCATGGCGGTTTACTCCAGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCGTTTTCTGAAATGTTTGGTACATTTTCGCTCTCCGTTGGTGCTGCTGTAGGCATGGAGTTTTGGGCAAGATGGGCGCATAGGGCTCTTTGGCACGCTTCTTTGTGGCATATGCACCAGTCTCACCATAAACCAAGAGAAGGACCGTTTGAATTGAACGATGTTTTCGCCATCATCAACGCTGTGCCCGCCATAGCTCTTCTCTCTTACGGCTTCTTCCACAAAGGCCTCGTCCCCGGTCTCTGCTTCGGCGCTGGCCTCGGCATTACTGTGTTTGGGATGGCCTATATGTTCGTCCACGACGGTCTTGTTCACAGAAGATTCCCTGTGGGTCCCATTGCCAACGTGCCTTATTTTAGAATGGTCGCTGCTGCTCACAAGGTAAATTCAATTCATTTTTTAAATATTCATTTCTTTTTCTTAACCTATTATTTTAAAATGCTTATTCTCTTTAACGAGTTACCTAATTTGTTACATTATAAATCTTATTTTGATCACTAA 909 50.39 MAAGLSSAAVSPKPFRHLFLLPSNLSPKPPAPFLFPPSALRNSRIRWNLRRKTLLTVCVLLGDQNSSGEVESLSDEESPIVVPQIPPPRVAERLARKKSERSTYLIAAVMSSFGITSMAVMAVYSRFYWQMEGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHASLWHMHQSHHKPREGPFELNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYFRMVAAAHKVNSIHFLNIHFFFLTYYFKMLILFNELPNLLHYKSYFDH 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7250467 7254132 + Sed0020922.3 Sed07g0990 719854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0990 302 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 277 IPR045019 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0988 Sed-Chr7:7250467 Sed07g0990 Sed-Chr7:7250467 4.90E-151 dispersed
Sed07g0990 Sed-Chr7:7250467 Sed13g0115 Sed-Chr13:768483 7.70E-117 dispersed
Sed07g0989 Sed-Chr7:7250467 Sed07g0990 Sed-Chr7:7250467 1.40E-124 tandem
Sed07g0990 Sed-Chr7:7250467 Sed07g0991 Sed-Chr7:7250467 1.30E-124 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0990 K15746 - csv:101212140 441.81