Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1028 ATGAATCCCGCCGCCATCGAAGCTCCGTTCGCTGCAGCTCTGTTCCTACTTCTCACGGCGCCGCTCGCCGGAGCGCGGCTTCTGGTGGAGATGACGGTGGTTCGCAACGCCTCTTCCATCGGAGCCTTTTGTTTGGACGGAAGCTTGCCGGCGTACCACCTGGATACAGGATTCGGCGCCGGAGCGGGAAACTGGCTGCTACAGTTCGAGGGAGGTGGGTGGTGCAATGATGTAAACTCTTGTTTGGAAAGAGCGAATAGTCGAAGAGGATCAACGCGTTTGATGACCAAATGGGAAGATTTCAATGGCATTCTCAGCAATAATGCCTCTCTTAATCCAGATTTTTATAACTGGAACCGTGTGAAACTCAGGTACTGTGATGGAGCCTCATTTGGAGGAGATGCCTTATTTAACAATGGGACATCACTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATACTTGACCTTCTACCAAAAGGTTTGGGGACAGCAAGGAAGGCTTTGCTTTCTGGTTGCTCTGCTGGGGGCCTATCAACTTTTTTGCATTGTGAAAATTTTACCAATTATTTGCCAAGGAATGCCACTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGATATTGGTTTAAACCACACCATGAGGAACTTCTATAAGGATCTTGTGGCTCTGCAGGGGATGGAGCCAAATCTGAATGAAAACTGCACAGCCTCCTCTTACTTTCCAGATATGTGCATATTCCCTCAATATTCCTTGAAGTACATAGCAACACCATTTTTCATTCTGAATTCAGCCTATGATGTCTACCAAGTAAAAGAAAAGTTCTTCCTTTTTATCTGA 858 45.8 MNPAAIEAPFAAALFLLLTAPLAGARLLVEMTVVRNASSIGAFCLDGSLPAYHLDTGFGAGAGNWLLQFEGGGWCNDVNSCLERANSRRGSTRLMTKWEDFNGILSNNASLNPDFYNWNRVKLRYCDGASFGGDALFNNGTSLLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLSTFLHCENFTNYLPRNATVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVALQGMEPNLNENCTASSYFPDMCIFPQYSLKYIATPFFILNSAYDVYQVKEKFFLFI 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7443114 7463085 + Sed0010603.3 Sed07g1028 719892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1028 285 Pfam Pectinacetylesterase 26 279 IPR004963 GO:0016787(InterPro)
Sed07g1028 285 PANTHER NOTUM-RELATED 22 280 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1028 Sed-Chr7:7443114 Sed07g1033 Sed-Chr7:7454697 1.10E-96 dispersed
Sed07g1027 Sed-Chr7:7443114 Sed07g1028 Sed-Chr7:7443114 1.40E-163 tandem
Sed07g1028 Sed-Chr7:7443114 Sed07g1029 Sed-Chr7:7443114 1.00E-163 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1028 K19882 - csv:101216160 506.908