Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1029 ATGAATCCCGCCGCCATCGAAGCTCCGTTCGCTGCAGCTCTGTTCCTACTTCTCACGGCGCCGCTCGCCGGAGCGCGGCTTCTGGTGGAGATGACGGTGGTTCGCAACGCCTCTTCCATCGGAGCCTTTTGTTTGGACGGAAGCTTGCCGGCGTACCACCTGGATACAGGATTCGGCGCCGGAGCGGGAAACTGGCTGCTACAGTTCGAGGGAGGTGGGTGGTGCAATGATGTAAACTCTTGTTTGGAAAGAGCGAATAGTCGAAGAGGATCAACGCGTTTGATGACCAAATGGGAAGATTTCAATGGCATTCTCAGCAATAATGCCTCTCTTAATCCAGATTTTTATAACTGGAACCGTGTGAAACTCAGGTACTGTGATGGAGCCTCATTTGGAGGAGATGCCTTATTTAACAATGGGACATCACTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATACTTGACCTTCTACCAAAAGGTTTGGGGACAGCAAGGAAGGCTTTGCTTTCTGGTTGCTCTGCTGGGGGCCTATCAACTTTTTTGCATTGTGAAAATTTTACCAATTATTTGCCAAGGAATGCCACTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGATATTGGTTTAAACCACACCATGAGGAACTTCTATAAGGATCTTGTGGCTCTGCAGGGGATGGAGCCAAATCTGAATGAAAACTGCACAGCCTCCTCTTACTTTCCAGATATGTGCATATTCCCTCAATATTCCTTGAAGTACATAGCAACACCATTTTTCATTCTGAATTCAGCCTATGATGTCTACCAATTTCATCATGGATTGGTGCCACCATCTGCTGATTTACGTGGACATTGGAATCACTGCAAAATGAATCCAGCAGAATGTAGTGAACCACAGATTGAGGTACTGCAAGGTCTAAGAATGAGCATGCTTTCTGCACTAAGATTATTCTATGAATATTCAAGTAAAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCCCAAGACACATGGTTCGGAGAGGACTCCCCAACAATTGATAACAAGACTATAGCAGAAGCAGTTGGAGATTGGTACTTTAACAGAAGGAACATGAAGGAAATTGATTGTGCTTATCCATGTGACTCTACTTGCCATAATCTTATACCATGA 1188 44.36 MNPAAIEAPFAAALFLLLTAPLAGARLLVEMTVVRNASSIGAFCLDGSLPAYHLDTGFGAGAGNWLLQFEGGGWCNDVNSCLERANSRRGSTRLMTKWEDFNGILSNNASLNPDFYNWNRVKLRYCDGASFGGDALFNNGTSLLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLSTFLHCENFTNYLPRNATVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVALQGMEPNLNENCTASSYFPDMCIFPQYSLKYIATPFFILNSAYDVYQFHHGLVPPSADLRGHWNHCKMNPAECSEPQIEVLQGLRMSMLSALRLFYEYSSKGGMFINSCFAHCQSESQDTWFGEDSPTIDNKTIAEAVGDWYFNRRNMKEIDCAYPCDSTCHNLIP 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7443114 7463085 + Sed0010603.9 Sed07g1029 719893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1029 395 PANTHER NOTUM-RELATED 22 393 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Sed07g1029 395 Pfam Pectinacetylesterase 26 375 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1026 Sed-Chr7:7443114 Sed07g1029 Sed-Chr7:7443114 1.00E-241 dispersed
Sed07g1027 Sed-Chr7:7443114 Sed07g1029 Sed-Chr7:7443114 1.00E-241 dispersed
Sed07g1029 Sed-Chr7:7443114 Sed07g1033 Sed-Chr7:7454697 1.10E-174 dispersed
Sed07g1028 Sed-Chr7:7443114 Sed07g1029 Sed-Chr7:7443114 1.00E-163 tandem
Sed07g1029 Sed-Chr7:7443114 Sed07g1030 Sed-Chr7:7454697 5.30E-174 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1029 K19882 - csv:101216160 743.421