Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1030 ATGGAGCAGACAACAACATCTTCAAAGGGAGATTTTTATAACTGGAACCGTGTGAAACTCAGGTACTGTGATGGAGCCTCATTTGGAGGAGATGCCTTATTTAACAATGGGACATCACTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATACTTGACCTTCTACCAAAAGGTTTGGGGACAGCAAGGAAGGCTTTGCTTTCTGGTTGCTCTGCTGGGGGCCTATCAACTTTTTTGCATTGTGAAAATTTTACCAATTATTTGCCAAGGAATGCCACTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGATATTGGTTTAAACCACACCATGAGGAACTTCTATAAGGATCTTGTGGCTCTGCAGGGGATGGAGCCAAATCTGAATGAAAACTGCACAGCCTCCTCTTACTTTCCAGATATGTGCATATTCCCTCAATATTCCTTGAAGTACATAGCAACACCATTTTTCATTCTGAATTCAGCCTATGATGTCTACCAATTTCATCATGGATTGGTGCCACCATCTGCTGATTTACGTGGACATTGGAATCACTGCAAAATGAATCCAGCAGAATGTAGTGAACCACAGATTGAGGTACTGCAAGGTCTAAGAATGAGCATGCTTTCTGCACTAAGATTATTCTATGAATATTCAAGTAAAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCCCAAGACACATGGTTCGGAGAGGACTCCCCAACAATTGATAACAAGACTATAGCAGAAGCAGTTGGAGATTGGTACTTTAACAGAAGGAACATGAAGGAAATTGATTGTGCTTATCCATGTGACTCTACTTGCCATAATCTTATACCATGA 879 40.27 MEQTTTSSKGDFYNWNRVKLRYCDGASFGGDALFNNGTSLLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLSTFLHCENFTNYLPRNATVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVALQGMEPNLNENCTASSYFPDMCIFPQYSLKYIATPFFILNSAYDVYQFHHGLVPPSADLRGHWNHCKMNPAECSEPQIEVLQGLRMSMLSALRLFYEYSSKGGMFINSCFAHCQSESQDTWFGEDSPTIDNKTIAEAVGDWYFNRRNMKEIDCAYPCDSTCHNLIP 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7454697 7463085 + Sed0010603.4 Sed07g1030 719894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1030 292 Pfam Pectinacetylesterase 7 272 IPR004963 GO:0016787(InterPro)
Sed07g1030 292 PANTHER NOTUM-RELATED 6 290 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1030 Sed-Chr7:7454697 Sed07g1032 Sed-Chr7:7454697 1.40E-179 dispersed
Sed07g1029 Sed-Chr7:7443114 Sed07g1030 Sed-Chr7:7454697 5.30E-174 tandem
Sed07g1030 Sed-Chr7:7454697 Sed07g1031 Sed-Chr7:7454697 1.30E-174 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1030 K19882 - csv:101216160 561.992