Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1033 ATGAATCTGTGTTGTTTTGTTGTTCTCGGTGAACCAGATTTTTATAACTGGAACCGTGTGAAACTCAGGTACTGTGATGGAGCCTCATTTGGAGGAGATGCCTTATTTAACAATGGGACATCACTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATACTTGACCTTCTACCAAAAGGTTTGGGGACAGCAAGGAAGGCTTTGCTTTCTGGTTGCTCTGCTGGGGGCCTATCAACTTTTTTGCATTGTGAAAATTTTACCAATTATTTGCCAAGGAATGCCACTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGATATTGGTTTAAACCACACCATGAGGAACTTCTATAAGGATCTTGTGGCTCTGCAGGGGATGGAGCCAAATCTGAATGAAAACTGCACAGCCTCCTCTTACTTTCCAGATATGTGCATATTCCCTCAATATTCCTTGAAGTACATAGCAACACCATTTTTCATTCTGAATTCAGCCTATGATGTCTACCAATTTCATCATGGATTGGTGCCACCATCTGCTGATTTACGTGGACATTGGAATCACTGCAAAATGAATCCAGCAGAATGTAGTGAACCACAGATTGAGGTACTGCAAGGTCTAAGAATGAGCATGCTTTCTGCACTAAGATTATTCTATGAATATTCAAGTAAAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCCCAAGACACATGGTTCGGAGAGGACTCCCCAACAATTGATAACAAGACTATAGCAGAAGCAGTTGGAGATTGGTACTTTAACAGAAGGAACATGAAGGAAATTGATTGTGCTTATCCATGTGACTCTACTTGCCATAATCTTATACCATGA 885 40.11 MNLCCFVVLGEPDFYNWNRVKLRYCDGASFGGDALFNNGTSLLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLSTFLHCENFTNYLPRNATVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVALQGMEPNLNENCTASSYFPDMCIFPQYSLKYIATPFFILNSAYDVYQFHHGLVPPSADLRGHWNHCKMNPAECSEPQIEVLQGLRMSMLSALRLFYEYSSKGGMFINSCFAHCQSESQDTWFGEDSPTIDNKTIAEAVGDWYFNRRNMKEIDCAYPCDSTCHNLIP 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7454697 7463085 + Sed0010603.7 Sed07g1033 719897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1033 294 PANTHER NOTUM-RELATED 11 292 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Sed07g1033 294 Pfam Pectinacetylesterase 11 274 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1028 Sed-Chr7:7443114 Sed07g1033 Sed-Chr7:7454697 1.10E-96 dispersed
Sed07g1029 Sed-Chr7:7443114 Sed07g1033 Sed-Chr7:7454697 1.10E-174 dispersed
Sed07g1033 Sed-Chr7:7454697 Sed13g0747 Sed-Chr13:5311932 2.40E-78 dispersed
Sed07g1032 Sed-Chr7:7454697 Sed07g1033 Sed-Chr7:7454697 6.70E-174 tandem
Sed07g1033 Sed-Chr7:7454697 Sed07g1034 Sed-Chr7:7454697 1.80E-174 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1033 K19882 - csv:101216160 564.688