Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1034 ATGTATCAGTGTCATAAAGTTGGCTGGGTCGGGTTGGTTTTAGGAGATTTTTATAACTGGAACCGTGTGAAACTCAGGTACTGTGATGGAGCCTCATTTGGAGGAGATGCCTTATTTAACAATGGGACATCACTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATACTTGACCTTCTACCAAAAGGTTTGGGGACAGCAAGGAAGGCTTTGCTTTCTGGTTGCTCTGCTGGGGGCCTATCAACTTTTTTGCATTGTGAAAATTTTACCAATTATTTGCCAAGGAATGCCACTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGATATTGGTTTAAACCACACCATGAGGAACTTCTATAAGGATCTTGTGGCTCTGCAGGGGATGGAGCCAAATCTGAATGAAAACTGCACAGCCTCCTCTTACTTTCCAGATATGTGCATATTCCCTCAATATTCCTTGAAGTACATAGCAACACCATTTTTCATTCTGAATTCAGCCTATGATGTCTACCAATTTCATCATGGATTGGTGCCACCATCTGCTGATTTACGTGGACATTGGAATCACTGCAAAATGAATCCAGCAGAATGTAGTGAACCACAGATTGAGGTACTGCAAGGTCTAAGAATGAGCATGCTTTCTGCACTAAGATTATTCTATGAATATTCAAGTAAAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCCCAAGACACATGGTTCGGAGAGGACTCCCCAACAATTGATAACAAGACTATAGCAGAAGCAGTTGGAGATTGGTACTTTAACAGAAGGAACATGAAGGAAATTGATTGTGCTTATCCATGTGACTCTACTTGCCATAATCTTATACCATGA 894 40.38 MYQCHKVGWVGLVLGDFYNWNRVKLRYCDGASFGGDALFNNGTSLLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLSTFLHCENFTNYLPRNATVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVALQGMEPNLNENCTASSYFPDMCIFPQYSLKYIATPFFILNSAYDVYQFHHGLVPPSADLRGHWNHCKMNPAECSEPQIEVLQGLRMSMLSALRLFYEYSSKGGMFINSCFAHCQSESQDTWFGEDSPTIDNKTIAEAVGDWYFNRRNMKEIDCAYPCDSTCHNLIP 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7454697 7463085 + Sed0010603.8 Sed07g1034 719898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1034 297 Pfam Pectinacetylesterase 16 277 IPR004963 GO:0016787(InterPro)
Sed07g1034 297 PANTHER NOTUM-RELATED 16 295 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1031 Sed-Chr7:7454697 Sed07g1034 Sed-Chr7:7454697 2.50E-184 dispersed
Sed07g1032 Sed-Chr7:7454697 Sed07g1034 Sed-Chr7:7454697 1.30E-174 dispersed
Sed07g1034 Sed-Chr7:7454697 Sed13g0747 Sed-Chr13:5311932 2.60E-77 dispersed
Sed07g1033 Sed-Chr7:7454697 Sed07g1034 Sed-Chr7:7454697 1.80E-174 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1034 K19882 - csv:101216160 561.992