Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g1034 | ATGTATCAGTGTCATAAAGTTGGCTGGGTCGGGTTGGTTTTAGGAGATTTTTATAACTGGAACCGTGTGAAACTCAGGTACTGTGATGGAGCCTCATTTGGAGGAGATGCCTTATTTAACAATGGGACATCACTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATACTTGACCTTCTACCAAAAGGTTTGGGGACAGCAAGGAAGGCTTTGCTTTCTGGTTGCTCTGCTGGGGGCCTATCAACTTTTTTGCATTGTGAAAATTTTACCAATTATTTGCCAAGGAATGCCACTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGATATTGGTTTAAACCACACCATGAGGAACTTCTATAAGGATCTTGTGGCTCTGCAGGGGATGGAGCCAAATCTGAATGAAAACTGCACAGCCTCCTCTTACTTTCCAGATATGTGCATATTCCCTCAATATTCCTTGAAGTACATAGCAACACCATTTTTCATTCTGAATTCAGCCTATGATGTCTACCAATTTCATCATGGATTGGTGCCACCATCTGCTGATTTACGTGGACATTGGAATCACTGCAAAATGAATCCAGCAGAATGTAGTGAACCACAGATTGAGGTACTGCAAGGTCTAAGAATGAGCATGCTTTCTGCACTAAGATTATTCTATGAATATTCAAGTAAAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCCCAAGACACATGGTTCGGAGAGGACTCCCCAACAATTGATAACAAGACTATAGCAGAAGCAGTTGGAGATTGGTACTTTAACAGAAGGAACATGAAGGAAATTGATTGTGCTTATCCATGTGACTCTACTTGCCATAATCTTATACCATGA | 894 | 40.38 | MYQCHKVGWVGLVLGDFYNWNRVKLRYCDGASFGGDALFNNGTSLLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLSTFLHCENFTNYLPRNATVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVALQGMEPNLNENCTASSYFPDMCIFPQYSLKYIATPFFILNSAYDVYQFHHGLVPPSADLRGHWNHCKMNPAECSEPQIEVLQGLRMSMLSALRLFYEYSSKGGMFINSCFAHCQSESQDTWFGEDSPTIDNKTIAEAVGDWYFNRRNMKEIDCAYPCDSTCHNLIP | 297 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7454697 | 7463085 | + | Sed0010603.8 | Sed07g1034 | 719898 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g1034 | 297 | Pfam | Pectinacetylesterase | 16 | 277 | IPR004963 | GO:0016787(InterPro) | |
Sed07g1034 | 297 | PANTHER | NOTUM-RELATED | 16 | 295 | IPR004963 | GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g1031 | Sed-Chr7:7454697 | Sed07g1034 | Sed-Chr7:7454697 | 2.50E-184 | dispersed | |
Sed07g1032 | Sed-Chr7:7454697 | Sed07g1034 | Sed-Chr7:7454697 | 1.30E-174 | dispersed | |
Sed07g1034 | Sed-Chr7:7454697 | Sed13g0747 | Sed-Chr13:5311932 | 2.60E-77 | dispersed | |
Sed07g1033 | Sed-Chr7:7454697 | Sed07g1034 | Sed-Chr7:7454697 | 1.80E-174 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g1034 | K19882 | - | csv:101216160 | 561.992 |