Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed07g1035 | ATGTATGAAAAACTTTCAAATGAAGAAAGAAATAGAAGTCATTTTTTAAACATAGCTCAATACCACATTGAGATTGAAGAACAAAAATGTCAAAGCAAATATCTCTTCATTGGGTTAACTATGTGGATCATTAGGGTCTTAATTGTGCTCATGTTAGTGAGAGTGATGGTTTCATGGTGGATTTTACCAATTTTGTTTCATAAAAAGTTGAAAGGAAATGGATTTGGAGGTCCTCCTCCAATATTTCCTCTTGGAAACATTTCTGAGATGAAGAAAATAAAGAAAGCTTCTACCTCCATTAATGGCAGCTCCTTTAAAGCTTCTTCTTTAAATGTCTCCCATGATATTCATTCCACTGTTTTCCCTCACTTTGCTCAATGGCAGGCCTCTTATGGGAAGAAGTTTATATATTGGTTGGGGACAGAACCATTTTTGTACATTGCAGATCCACACTTTGTGAAGAAGATATCTGAAGCTGTGATGGGAAAGGGTTGGGGGAAGCCAGCAGTATTCAAAAACGATAGGGAACCGATGTTCGGTGACGGTCTCGTCATGACCGAAGGCGACGACTGGGTTCGCCATCGACACGTTCTCACGCCAGCCTTCAACCCCGCTAATTTGAAGGAAATGACAAAGTCGATGGTGGGGACCACCACGAAAATGCTAAACGAGTGGAGCAGCAGCCTCGTGAGCTCCGCCCAATCAGAGATCGACGTGGAGAGGGAAATAACCGCCACCGCCGGCGACATAATCGCAAAGGCCAGCTTCGGGATCTCCGGCGACGGCGGCCGAGACGCCTTCCACAAACTCCGATCTCTCCAGTTCACTCTGTTCGAGAACAGCACTTACGTCGGCGTTCCATTCAGCGGCCTCTTCCTCTCCCCGGCCAGAACCCTGGCCGCCAAGCGACTCGGCGCCGAAATCGACCGCCTGTTCTTATCGATCATCTCGGAGAGGAAAGCGTCGCCGGATTCCTCCTCCGATCTGCTCGGCCGGTTGATTGAGAGCCAGAGGAGCGGCGGCGGCGGCGGCGGCGGAGAGACGAGGCTGACGACGAGAGAGACGGTGGATGAGTGCAAGACGTTCTTCTTCGGCGGCCATGAGACGACGGCGCTGGCGATTAGTTGGACGCTGCTGCTGCTGGCGGCGACGCCGGAATGGCAAAATGTCTTGCGAGAGGAGATTAAAGAGGTTGTTGGAGATAATGAAATTGATTTCGATTTGCTTTCCAAACTCAAAAAGATGGGATGGGTGTTCAATGAGGTACTTAGGCTATACCCATCAGCTCCAAACATACAAAGACAAGCAAAAGGAGACATCAAAGCCGGCGACACGACGATCCCAAAAGGGACCAACATATGGATTGACATCGTAGCGATGCATCACGACCCGACCCTGTGGGGCGAGGACGTGAACGAGTTCAAGCCCGAGAGGTTCGAGAACGACAACATTTACGGGGGGTGCAACCACAAGATGGGATATTTGCCATTTGGTTTTGGAGGGAGAATGTGCATTGGTAGAAACTTGTCTAAAATGGAGTACAAGATTGTGTTAACCCTAATTCTCTCTAGGTTTTCACTCACTCTTTCTCCTTCTTATGCTCATTCTCCTTCCATTTTGCTCTCTTTGAGACCTTCCCATGGCCTTCCTCTCATTCTAAAACCCCTTCACCCTTAA | 1677 | 48.42 | MYEKLSNEERNRSHFLNIAQYHIEIEEQKCQSKYLFIGLTMWIIRVLIVLMLVRVMVSWWILPILFHKKLKGNGFGGPPPIFPLGNISEMKKIKKASTSINGSSFKASSLNVSHDIHSTVFPHFAQWQASYGKKFIYWLGTEPFLYIADPHFVKKISEAVMGKGWGKPAVFKNDREPMFGDGLVMTEGDDWVRHRHVLTPAFNPANLKEMTKSMVGTTTKMLNEWSSSLVSSAQSEIDVEREITATAGDIIAKASFGISGDGGRDAFHKLRSLQFTLFENSTYVGVPFSGLFLSPARTLAAKRLGAEIDRLFLSIISERKASPDSSSDLLGRLIESQRSGGGGGGGETRLTTRETVDECKTFFFGGHETTALAISWTLLLLAATPEWQNVLREEIKEVVGDNEIDFDLLSKLKKMGWVFNEVLRLYPSAPNIQRQAKGDIKAGDTTIPKGTNIWIDIVAMHHDPTLWGEDVNEFKPERFENDNIYGGCNHKMGYLPFGFGGRMCIGRNLSKMEYKIVLTLILSRFSLTLSPSYAHSPSILLSLRPSHGLPLILKPLHP | 558 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 7464848 | 7474372 | - | Sed0018075.1 | Sed07g1035 | 719899 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed07g1035 | 558 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 49 | 550 | IPR050665 | GO:0004497(PANTHER) | |
| Sed07g1035 | 558 | Pfam | Cytochrome P450 | 120 | 532 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1035 | 558 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 497 | 506 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed07g1035 | 558 | Gene3D | Cytochrome P450 | 106 | 554 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1035 | 558 | PRINTS | E-class P450 group I signature | 374 | 400 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1035 | 558 | PRINTS | E-class P450 group I signature | 128 | 147 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1035 | 558 | PRINTS | E-class P450 group I signature | 354 | 371 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1035 | 558 | PRINTS | E-class P450 group I signature | 494 | 504 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1035 | 558 | PRINTS | E-class P450 group I signature | 504 | 527 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1035 | 558 | PRINTS | P450 superfamily signature | 365 | 382 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1035 | 558 | PRINTS | P450 superfamily signature | 495 | 504 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1035 | 558 | PRINTS | P450 superfamily signature | 417 | 428 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1035 | 558 | PRINTS | P450 superfamily signature | 504 | 515 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1035 | 558 | SUPERFAMILY | Cytochrome P450 | 115 | 555 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed01g3583 | Sed-Chr1:64936238 | Sed07g1035 | Sed-Chr7:7464848 | 4.30E-83 | dispersed | |
| Sed07g1035 | Sed-Chr7:7464848 | Sed11g2101 | Sed-Chr11:34922951 | 7.20E-84 | dispersed | |
| Sed09g0161 | Sed-Chr9:1253316 | Sed07g1035 | Sed-Chr7:7464848 | 8.40E-87 | transposed | |
| Sed09g0175 | Sed-Chr9:1414264 | Sed07g1035 | Sed-Chr7:7464848 | 1.10E-83 | transposed | |
| Sed05g0502 | Sed-Chr5:3448947 | Sed07g1035 | Sed-Chr7:7464848 | 6.30E-183 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed07g1035 | - | - | - | 0.0 |