Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1035 ATGTATGAAAAACTTTCAAATGAAGAAAGAAATAGAAGTCATTTTTTAAACATAGCTCAATACCACATTGAGATTGAAGAACAAAAATGTCAAAGCAAATATCTCTTCATTGGGTTAACTATGTGGATCATTAGGGTCTTAATTGTGCTCATGTTAGTGAGAGTGATGGTTTCATGGTGGATTTTACCAATTTTGTTTCATAAAAAGTTGAAAGGAAATGGATTTGGAGGTCCTCCTCCAATATTTCCTCTTGGAAACATTTCTGAGATGAAGAAAATAAAGAAAGCTTCTACCTCCATTAATGGCAGCTCCTTTAAAGCTTCTTCTTTAAATGTCTCCCATGATATTCATTCCACTGTTTTCCCTCACTTTGCTCAATGGCAGGCCTCTTATGGGAAGAAGTTTATATATTGGTTGGGGACAGAACCATTTTTGTACATTGCAGATCCACACTTTGTGAAGAAGATATCTGAAGCTGTGATGGGAAAGGGTTGGGGGAAGCCAGCAGTATTCAAAAACGATAGGGAACCGATGTTCGGTGACGGTCTCGTCATGACCGAAGGCGACGACTGGGTTCGCCATCGACACGTTCTCACGCCAGCCTTCAACCCCGCTAATTTGAAGGAAATGACAAAGTCGATGGTGGGGACCACCACGAAAATGCTAAACGAGTGGAGCAGCAGCCTCGTGAGCTCCGCCCAATCAGAGATCGACGTGGAGAGGGAAATAACCGCCACCGCCGGCGACATAATCGCAAAGGCCAGCTTCGGGATCTCCGGCGACGGCGGCCGAGACGCCTTCCACAAACTCCGATCTCTCCAGTTCACTCTGTTCGAGAACAGCACTTACGTCGGCGTTCCATTCAGCGGCCTCTTCCTCTCCCCGGCCAGAACCCTGGCCGCCAAGCGACTCGGCGCCGAAATCGACCGCCTGTTCTTATCGATCATCTCGGAGAGGAAAGCGTCGCCGGATTCCTCCTCCGATCTGCTCGGCCGGTTGATTGAGAGCCAGAGGAGCGGCGGCGGCGGCGGCGGCGGAGAGACGAGGCTGACGACGAGAGAGACGGTGGATGAGTGCAAGACGTTCTTCTTCGGCGGCCATGAGACGACGGCGCTGGCGATTAGTTGGACGCTGCTGCTGCTGGCGGCGACGCCGGAATGGCAAAATGTCTTGCGAGAGGAGATTAAAGAGGTTGTTGGAGATAATGAAATTGATTTCGATTTGCTTTCCAAACTCAAAAAGATGGGATGGGTGTTCAATGAGGTACTTAGGCTATACCCATCAGCTCCAAACATACAAAGACAAGCAAAAGGAGACATCAAAGCCGGCGACACGACGATCCCAAAAGGGACCAACATATGGATTGACATCGTAGCGATGCATCACGACCCGACCCTGTGGGGCGAGGACGTGAACGAGTTCAAGCCCGAGAGGTTCGAGAACGACAACATTTACGGGGGGTGCAACCACAAGATGGGATATTTGCCATTTGGTTTTGGAGGGAGAATGTGCATTGGTAGAAACTTGTCTAAAATGGAGTACAAGATTGTGTTAACCCTAATTCTCTCTAGGTTTTCACTCACTCTTTCTCCTTCTTATGCTCATTCTCCTTCCATTTTGCTCTCTTTGAGACCTTCCCATGGCCTTCCTCTCATTCTAAAACCCCTTCACCCTTAA 1677 48.42 MYEKLSNEERNRSHFLNIAQYHIEIEEQKCQSKYLFIGLTMWIIRVLIVLMLVRVMVSWWILPILFHKKLKGNGFGGPPPIFPLGNISEMKKIKKASTSINGSSFKASSLNVSHDIHSTVFPHFAQWQASYGKKFIYWLGTEPFLYIADPHFVKKISEAVMGKGWGKPAVFKNDREPMFGDGLVMTEGDDWVRHRHVLTPAFNPANLKEMTKSMVGTTTKMLNEWSSSLVSSAQSEIDVEREITATAGDIIAKASFGISGDGGRDAFHKLRSLQFTLFENSTYVGVPFSGLFLSPARTLAAKRLGAEIDRLFLSIISERKASPDSSSDLLGRLIESQRSGGGGGGGETRLTTRETVDECKTFFFGGHETTALAISWTLLLLAATPEWQNVLREEIKEVVGDNEIDFDLLSKLKKMGWVFNEVLRLYPSAPNIQRQAKGDIKAGDTTIPKGTNIWIDIVAMHHDPTLWGEDVNEFKPERFENDNIYGGCNHKMGYLPFGFGGRMCIGRNLSKMEYKIVLTLILSRFSLTLSPSYAHSPSILLSLRPSHGLPLILKPLHP 558
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 7464848 7474372 - Sed0018075.1 Sed07g1035 719899
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1035 558 PANTHER CYTOCHROME P450 FAMILY MEMBER 49 550 IPR050665 GO:0004497(PANTHER)
Sed07g1035 558 Pfam Cytochrome P450 120 532 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g1035 558 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 497 506 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed07g1035 558 Gene3D Cytochrome P450 106 554 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g1035 558 PRINTS E-class P450 group I signature 374 400 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g1035 558 PRINTS E-class P450 group I signature 128 147 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g1035 558 PRINTS E-class P450 group I signature 354 371 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g1035 558 PRINTS E-class P450 group I signature 494 504 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g1035 558 PRINTS E-class P450 group I signature 504 527 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g1035 558 PRINTS P450 superfamily signature 365 382 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g1035 558 PRINTS P450 superfamily signature 495 504 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g1035 558 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g1035 558 PRINTS P450 superfamily signature 504 515 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g1035 558 SUPERFAMILY Cytochrome P450 115 555 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3583 Sed-Chr1:64936238 Sed07g1035 Sed-Chr7:7464848 4.30E-83 dispersed
Sed07g1035 Sed-Chr7:7464848 Sed11g2101 Sed-Chr11:34922951 7.20E-84 dispersed
Sed09g0161 Sed-Chr9:1253316 Sed07g1035 Sed-Chr7:7464848 8.40E-87 transposed
Sed09g0175 Sed-Chr9:1414264 Sed07g1035 Sed-Chr7:7464848 1.10E-83 transposed
Sed05g0502 Sed-Chr5:3448947 Sed07g1035 Sed-Chr7:7464848 6.30E-183 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1035 - - - 0.0