Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1090 ATGGCGAGAAAAGGAGGAGCAATTGGATCGTGGATTTGCGTGGTTCTGGTTTTGATTTCTGCGCGAACTCATGTCTCGGCCAGATCGGATAAGGAAATTAGGGAAAGATTTTATGGGAACTTGATCAACTCAACGGCTCCGACTTCCGGTGATGGTAGCATTGCCCAAATGTTCGACAAGGTGCTCGAGAAGGAGTTCTCCGACAATGATCTGCCTGAAGGCTCCGGTGGTAGCAGCTTCAATAACAGTGTCGCCGATCAAGAGGCAGAACTGGAGACGGTAGCTAAAATCACACACGAGAAGGGCAAGAAAAATGATAGTCAAAAGACGAATGGGACAAGGGCATTCCAGTTTCAGGATGTTTTCTCTCTAGAAAATGAAGAATCTGATGATGTTACAACGTTGATTGATAAAAAAGACAATGTATTTGTGATGTCAAACAAGAAATCCAAGTATCCGGTACTTCAAGTAGATTTGAGATTGATTTCAGACTTAGTGGTGGTTATTGTTTCTGCCGCAATTGGAGGAATCATCTTTTCTTGTTTAGGGCAACCGGTTATTGTTGGTTATCTTCTTGCGGGGTCAATCATTGGACCAGGAGGCCTAAAATTCATCAGTGAAATGGTGCAGGTTGAGACAGTGGCACAATTTGGTGTCGTATTTCTTCTTTTTGCTTTAGGTCTGGAGTTTTCGTTGACCAAGTTAAAAGTTGTTGGAGCTGTTGCTATTTTTGGAGGTTTTTTACAGATCATCATATTTATGTTCTTGTGTGGCATAATTGCCATGTTAAGTGGAGCTAAATTGTCTGAGGGTGTATTTGTTGGTTCATTTCTATCAATGTCATCAACAGCAGTGGTGGTGAAGTTCTTGGTAGAACGGAATAGTAGTAATACTCTTCATGGTCAAGTTACTATTGGAACACTTATCTTACAGGATTGTGCAGTTGGTTTGTTATTTGCCCTGCTCCCAGTTTTGGGTGGTCACAATGGTCTTGTGTTAGGAATGATATCTATGGGAAAGTTGCTACTGGTGTTGTCAGTATATCTCACAGCTGCATCAATTTTATCATGGTCATTTGTTCCCCGGTTTCTGAAGTTGATGATGCAGCTGTCCTCTCAAACAAATGAATTGTATCAGCTTGCTGCTGTGGCATTTTGCTTGGTGTCTGCCTGGTGCAGTGATAAGTTGGGCCTCAGTCTTGAGTTGGGTTCTTTTGTAGCTGGAGTTATGATATCTACCACCGAGTTCGGTCAACATACTTTAGATCAGGTGGAACCAATCCGCAATTTGTTTGCTGCTTTGTTCCTTTCAAGTATTGGAATGCTAATTCATGTACATTTCCTGTGGAGCCATTTGGATATTTTGCTAGCATCTGTAATGCTGGTTGTGTTTGTGAAGACAGCAGTTGCTACCGTAGTTGCAAAGGCATTTGGATACAGCATTAGAACTTCTTTTCAGGTTGGAGTCATGCTTGCTCAAATTGGTGAATTTGCATTTGTTCTCCTAAGCCGTGCTTCAAATCTTCATCTCATTGGGGGGAAAGTTTATCTTCTACTTATTGGAACAACAGCACTTAGTCTGGTGACCACCCCTCTTCTGTTCAAATTGATACCTGCCGTCTTGAATTTAGGGGTTCTCATGCATTGGTTTCCCTCTGAAAACATCATTCAAAATGAGGAGAAAGTATCAATGATTGAAGCACATAACAGAAAGTTGTGA 1719 41.65 MARKGGAIGSWICVVLVLISARTHVSARSDKEIRERFYGNLINSTAPTSGDGSIAQMFDKVLEKEFSDNDLPEGSGGSSFNNSVADQEAELETVAKITHEKGKKNDSQKTNGTRAFQFQDVFSLENEESDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGAVAIFGGFLQIIIFMFLCGIIAMLSGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSSNTLHGQVTIGTLILQDCAVGLLFALLPVLGGHNGLVLGMISMGKLLLVLSVYLTAASILSWSFVPRFLKLMMQLSSQTNELYQLAAVAFCLVSAWCSDKLGLSLELGSFVAGVMISTTEFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWSHLDILLASVMLVVFVKTAVATVVAKAFGYSIRTSFQVGVMLAQIGEFAFVLLSRASNLHLIGGKVYLLLIGTTALSLVTTPLLFKLIPAVLNLGVLMHWFPSENIIQNEEKVSMIEAHNRKL 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8012985 8020040 + Sed0014498.1 Sed07g1090 719954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1090 572 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 12 567 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Sed07g1090 572 Pfam Sodium/hydrogen exchanger family 169 535 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Sed07g1090 572 Gene3D - 159 542 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1090 Sed-Chr7:8012985 Sed08g1765 Sed-Chr8:32503088 7.90E-187 dispersed
Sed07g1090 Sed-Chr7:8012985 Sed02g1642 Sed-Chr2:51736712 2.00E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1090 K26735 - csv:101207607 1028.47