Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g1101 | ATGGAGGAGAAAGAAATCGGAGTTTCTAGGTTTACGATTACTAACAGTGAAGCCCTAGAGAGCTTCCAGTCAGCTCCAAGAGCCGAAACCCTAAAACCAACCGAGGAACATCAAGGAACAGAGCTCGCGGCTGCTACACCACCGGGATTCGCGACGGCGGCTGAGAAACCTCCGGCGAGCGCGGCGGTTTCCAGTACGGAAACGAAGAAGAAGAGAGGGAGACCGAGAAAGTACGGGCCGGACGGGAAGCGGTCGCTGACGCTGGCGCTATCTCCGATGCCGATTTCGTCGTCAATTCCGCTCACCGGAGGGCTTCCGAACTGGAAACGAGATAACGAGATGTCTCAAGCGATAGTTACGAAGCCGCAGAGATTCGAGTTCGAGAATCCTGGTCAGAGACTTGCATACACTGTTGGTGCAAATTTTACTCCCCATGTGATCACTGTCAATGCTGGCGAGGACATTACGATGAAGGTTATGTCTTTCTCTCAGCAAGAATCCCGAGCTATTTGCATTCTTTCTGCCAATGGCACAATTTCAAATGTTACACTTCGACAAGCAACTTCTTTTGGAGGTACCTTAACTTATGAGGGTTGTTTTGAAATACTCGCATTGACCGGATCGTATATGCCCACACAGAATGGTGCCGCAAAGAGCAGATGTGGTGGAATGAGTGTCTCGCTAGCAGGTCAAGATGGACGAGTCGTTGGCGGTGGACTTGCCGGGTTGTTGGTAGCTGCTGGTCCTGTGCAAGTAGGATAA | 762 | 51.05 | MEEKEIGVSRFTITNSEALESFQSAPRAETLKPTEEHQGTELAAATPPGFATAAEKPPASAAVSSTETKKKRGRPRKYGPDGKRSLTLALSPMPISSSIPLTGGLPNWKRDNEMSQAIVTKPQRFEFENPGQRLAYTVGANFTPHVITVNAGEDITMKVMSFSQQESRAICILSANGTISNVTLRQATSFGGTLTYEGCFEILALTGSYMPTQNGAAKSRCGGMSVSLAGQDGRVVGGGLAGLLVAAGPVQVG | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 8068997 | 8074346 | + | Sed0017302.2 | Sed07g1101 | 719965 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g1101 | 253 | ProSiteProfiles | PPC domain profile profile. | 139 | 253 | IPR005175 | - | |
Sed07g1101 | 253 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
Sed07g1101 | 253 | MobiDBLite | consensus disorder prediction | 9 | 23 | - | - | |
Sed07g1101 | 253 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 144 | 252 | IPR005175 | - | |
Sed07g1101 | 253 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 40 | 252 | IPR039605 | GO:0003680(InterPro) | |
Sed07g1101 | 253 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 141 | 252 | - | - | |
Sed07g1101 | 253 | Gene3D | - | 144 | 253 | - | - | |
Sed07g1101 | 253 | CDD | DUF296 | 143 | 252 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g1101 | Sed-Chr7:8068997 | Sed13g0195 | Sed-Chr13:1277102 | 6.50E-109 | dispersed | |
Sed07g1100 | Sed-Chr7:8068997 | Sed07g1101 | Sed-Chr7:8068997 | 1.30E-136 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g1101 | - | - | - | 0.0 |