Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1195 ATGGCGGACGGCGAATTGGAGCGAGGCGAGACCAATTGCGGCCTTACTTCCATGGATTCCATCGAATCGCGATGGGTATTTCAGGACGACGACCAATCGGAGATTGACGAGGACGATGAGGAGGAGGAGAATGCAGCGGCGCATCGTATGGATTTGGAGTCCGAGGAAGAAGATAATGTTGAGCAGAAGTTGATTCGTACTGGCCCGCGGATTGATTCCTTCGATGTCGAAGCCCTTGATGTTCCTGGTGCGCATAGAAGTGAATACGAGGACTTCAGCATGGGAAAGAAAATTGCTCTTGCTTTCCAGACCCTTGGGGTTGTATTTGGTGATGTTGGGACAAGCCCTCTGTATACCTTCAGTGTCATGTTCAACAAATTGCCTATTGATGGAGATGAAGATGTTATTGGGGCATTATCTCTAGTTATCTACACCTTAATCTTGATTTCGCTAGTCAAGTATGTTCTTGTTGTTCTCCTGGCAAACGATGATGGTGAAGGTGGCACTTTTGCCTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTTCTCCCAAATCAACTTCCTTCTGACACCCGAATATCAAGTTTTAGGTTAAAGGTGCCATCGGCTGAGTTGGAAAGATCATTAAAAATAAAGGAAAAACTTGAGGCTTCCCTTACTTTAAAGAAGCTTCTTTTGATGCTCGTTCTTGCTGGAACTTCTATGGTAATAGCTGATGGAGTTGTTACACCAGCAATGTCAGTAATGTCAGCCGTTGGTGGACTAAAGATTGCAGTGGATGCAATCAACCAAGATGAGGCTGTGATGATCTCAGTTGCCTGTCTTATAGTTTTGTTTAGTGTCCAGAAGTATGGCACTAGCAAAGTGGGGCTCGCTGTTGGTCCTGCATTATTCATATGGTTTTGTACACTTGCAGGTCTTGGGATTTATAACCTTCTCATATATGATAGCAGTGTCTTGAAGGCATTCAATCCCGTTCATATTTACTATTTCTTCAAAAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGTTGTCTTTTATGTGCTACAGGTTCTGAGGCAATGTTTGCAGATCTTTGCTATTTCTCTGTCCGGTCAATACAGCTTACGTTTGCGTTTCTCGTCTTGCCTTGTCTTTTCTTGGGTTATTTGGGTCAAGCTGCCTACCTTATATCAAACCACAATGGAGCTGAGCACGTTTTTTATAATTCTGTTCCTAAAAGTGTCTTCTGGCCAGTGTTTTTCATTGCTAACGTTGCTGCATTGATTGCCAGTCGGGCAATGACTACGGCTACCTTTTCGTGTATAAAACAATCAACAGCACTTGGTTGTTTTCCTCGTCTTAAGATCATTCATACATCTAGGAAATTCATGGGGCAGATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCAGTTTGCCTGGTAGTTGTTTGCTCCATATCGAGCATGTATGAGATTGGAAACGCATACGGTATTGCCGAATTGGGAGTGATGATGATGACAACTGTCTTGGTAACCCTTGTTATGCTTCTCATATGGCAGATAAATATTATCATCGTGATGATTTTTGCTATGATCTTTCTTGGGATAGAATTGATATTTTTCTCCTCTGTATTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTCTTCGCAGTGATTATGTTCTTCATTATGTTTGTCTGGAACTACGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAACAAAAGCTGTCTATGGATTTAATGCGGGAACTCGGTTGTAATCTCGGGACGATCAGAGCTCCTGGCATTGGTTTGCTCTATAATGAACTAGTGAAAGGAGTTCCTGCAATATTTGGCCATTTTCTGACTACTCTTCCTGCAGTTCATTCAATGATTATATTTGTCTGTATCAAGTACGTACCGGTTCCTTTTGTGCCTCAGAGTGAGAGATTTCTTTTCCGCCGAGTCTGCCCTAAGAGCTATCACATCTTTCGCTGCATTGCCAGGTATGGTTACAAGGATGCCCGAAAAGAAAATCATCAGACGTTTGAACAGCTCTTGATTGAAAGCCTCGAGAAATTCATCCGTCGAGAAGCACAAGAGAGGTCATTAGAGAGTGATGGAGATGACGATACTGATTCGGACGAGATCCACAGATCACAGTTTCTCATAGCTCCAAATGGAAGTGTCTATTCACTTGGCATTCCTCTTCTAGCTGAATTCAACCAGATTACACCCATAACTGAAATCATCGACATACCGGAAGAGGTTCAGCCAATAGAATCTCTAGACCCCTCGATCCCAGATGCCGAGCAATCACTTGAGAGAGAGCTTTCCTTTATACGAAAGGCTAAAGAATCGGGAGTTGTGTACCTTCTTGGTCATGGAGACATTAGAGCTAGAAAGAATTCTTGGTTTATCAAGAAGCTAGTGATCAATTACTTCTATGCATTTTTAAGAAAGAACAGCAGGAGGGGTATTGCCAACTTGAGTGTTTCCCACACCCACCTGATGCAGGTTGGCATGACATACATGGTTTAG 2541 42.9 MADGELERGETNCGLTSMDSIESRWVFQDDDQSEIDEDDEEEENAAAHRMDLESEEEDNVEQKLIRTGPRIDSFDVEALDVPGAHRSEYEDFSMGKKIALAFQTLGVVFGDVGTSPLYTFSVMFNKLPIDGDEDVIGALSLVIYTLILISLVKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLEASLTLKKLLLMLVLAGTSMVIADGVVTPAMSVMSAVGGLKIAVDAINQDEAVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCTLAGLGIYNLLIYDSSVLKAFNPVHIYYFFKRNSTNAWYCLGGCLLCATGSEAMFADLCYFSVRSIQLTFAFLVLPCLFLGYLGQAAYLISNHNGAEHVFYNSVPKSVFWPVFFIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSMYEIGNAYGIAELGVMMMTTVLVTLVMLLIWQINIIIVMIFAMIFLGIELIFFSSVLWGVGDGSWIILVFAVIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGVPAIFGHFLTTLPAVHSMIIFVCIKYVPVPFVPQSERFLFRRVCPKSYHIFRCIARYGYKDARKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDTDSDEIHRSQFLIAPNGSVYSLGIPLLAEFNQITPITEIIDIPEEVQPIESLDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKNSWFIKKLVINYFYAFLRKNSRRGIANLSVSHTHLMQVGMTYMV 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8942966 8951319 + Sed0000600.1 Sed07g1195 720059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1195 846 NCBIfam potassium uptake protein 100 846 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed07g1195 846 Pfam K+ potassium transporter C-terminal domain 601 844 IPR053952 -
Sed07g1195 846 MobiDBLite consensus disorder prediction 30 62 - -
Sed07g1195 846 Pfam K+ potassium transporter integral membrane domain 100 586 IPR053951 -
Sed07g1195 846 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 81 846 IPR003855 GO:0000325(PANTHER)|GO:0005774(PANTHER)|GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed07g1195 846 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1195 Sed-Chr7:8942966 Sed13g0337 Sed-Chr13:2268690 4.8e-313 dispersed
Sed13g0336 Sed-Chr13:2268690 Sed07g1195 Sed-Chr7:8942966 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1195 - - - 0.0