Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1236 ATGCCTGGCATACCACTCGTGACTCGCGAAACTTCCTGTTCCAGAAACGCAGATCAAATGTGCCGTGTAGAATCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTTTATTGCAAGCCGGTTGAACTCTATAATATTCTTCAACGCCGTGCTATTAGAAATCCATTGTTTCTTCAAAGATGTTTAAACTACAAAATAGAGACAAAGCACAAGAGAAGGATCCAGATGACAATTTCAATTTCTAGGACTTTGAGTGGGGGTGGCCAGGCACATAATCTGTTTCCTATGTATGTCATCTTAGGAAGACTAGTCTCTGACATTACAGTTGCTGAGTTCTCTGGTGTATATCGCTTCAATCGAGCTTGCCTCCTAACTAGCATCAATAGAGTGGAATGCAATTCTCAAGTTATAGCTAATTTCATCCTCCCTGAAATTAACAAGCTTGCTGTGGAGGCAAAGTCTGGGTCACTTGCTATATTATTTGTTAGCTGCGTTGGATCCGCAAATACTTTGTCAGAAGTTGATTCAGTTGATGAGCCTCCATACATGGAATCTGTTCCTGTTGCAGGTTGTTGCTTATGGGGCAAGATACCACTGGAATCACTTTACATTTCATGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCCGAGATAATGTCAACTGTTGATATGCGCTCTTGTGTCCTGAAGACAAGTTACCTTGATGGAGAGAAGTGTCTGGGATTTCAAGTTCCATATAATTCTGATTCTATGCATACAGCACAGCAAGTACAGGTCACAATTTCTGCAGAAGAGTTTGGTGCTAGGGATAAATCTCCGTATAATACATACACGTACAGTGAAATACCTTCATCTTCACTATCCCATTTGAATCGGTTGAGGGCAGGAAATGTTGTTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACTGAAGTAACTGAAGACTTCTCCTGTCCATTTTGCTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGATGTCACTTGTTATCATTACACGATCTCTTCAACTTTGAATTTTGGGTAACTGAAGAGTATCAAGCTGTGAATGTTTCCACGAAGACTGATGTTTGGCGGTCTGAGATCATCGCGGATGGCATTGATCCAAAGCAGCAGACATTCTTCTTCTGCTCAAGGCATCTCAGACGCAAAAAAGTTAAGAATGTAGCTCAAAGTGGAAACCACGTACATCCTATTGTTGTAGAGTCTGAATATTCAGACAAGGCGGACGATGCTCAATCTAGCAAAGGTGAAAAGGCTCAAATATCAGGTTTTTTAAGTACCACTATGCATTCATCCAATGATCCTGACTGCGTTCAATCAATACCAGGGCATAATGTTGCGCCAACTATGCTTCAATTTGCCAAGACAAGAAAACTCTCGATTGAACGTGCAGACCCAAGACACTGTACCCTCTTAAGGAAGAGACAGTTCTTTCATTCCCACAGAGCTCAGCCCATGGCGCTGGAACAAGTGTTATCAGATCGAGATAGTGAAGATGAAGTAGATGATGATGTTGCTGATCTTGAAGATAGAAGGATGCTCGATGATTTTGTCGATGTAACAAAGGATGAGAAGCAAATGATGCATATGTGGAACTCATTTGTCAGGAAGCAACGGGTGCTGGCAGATGGGCATATCCCTTGGTGTTGTGAGGCATTTTCACAATTACATGGACCAAGCCTTGTCGAAACTCCAGCTCTTCTACGGTGCTGGAGATTGTTTATGATTAAGTTGTGGAACCATGGTCTACTTGATGCGAACTCCATGAACAATTGTAACATTATTCTTGACAGAATACATAGTGAAGCTTCTGATCCTAAAAGCTGA 1881 41.47 MPGIPLVTRETSCSRNADQMCRVESRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIRNPLFLQRCLNYKIETKHKRRIQMTISISRTLSGGGQAHNLFPMYVILGRLVSDITVAEFSGVYRFNRACLLTSINRVECNSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSANTLSEVDSVDEPPYMESVPVAGCCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTSYLDGEKCLGFQVPYNSDSMHTAQQVQVTISAEEFGARDKSPYNTYTYSEIPSSSLSHLNRLRAGNVVFNYRYYNNRLQKTEVTEDFSCPFCLVKCASFKGLRCHLLSLHDLFNFEFWVTEEYQAVNVSTKTDVWRSEIIADGIDPKQQTFFFCSRHLRRKKVKNVAQSGNHVHPIVVESEYSDKADDAQSSKGEKAQISGFLSTTMHSSNDPDCVQSIPGHNVAPTMLQFAKTRKLSIERADPRHCTLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWCCEAFSQLHGPSLVETPALLRCWRLFMIKLWNHGLLDANSMNNCNIILDRIHSEASDPKS 626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9202622 9224733 + Sed0010479.3 Sed07g1236 720100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1236 626 CDD ZnB-Zn_EMF2-like 301 375 - -
Sed07g1236 626 Pfam VEFS-Box of polycomb protein 477 612 IPR019135 -
Sed07g1236 626 PANTHER POLYCOMB GROUP PROTEIN 1 625 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Sed07g1236 626 CDD VEFS-box_EMF2-like 490 617 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g1675 Sed-Chr4:31430522 Sed07g1236 Sed-Chr7:9202622 1.80E-11 dispersed
Sed04g1676 Sed-Chr4:31437780 Sed07g1236 Sed-Chr7:9202622 2.00E-87 dispersed
Sed07g1236 Sed-Chr7:9202622 Sed07g1238 Sed-Chr7:9202622 0.00E+00 dispersed
Sed07g1235 Sed-Chr7:9202622 Sed07g1236 Sed-Chr7:9202622 0.00E+00 tandem
Sed07g1236 Sed-Chr7:9202622 Sed07g1237 Sed-Chr7:9202622 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1236 - - - 0.0