Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1238 ATGCCTGGCATACCACTCGTGACTCGCGAAACTTCCTGTTCCAGAAACGCAGATCAAATGTGCCGTGTAGAATCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTTTATTGCAAGCCGGTTGAACTCTATAATATTCTTCAACGCCGTGCTATTAGAAATCCATTGTTTCTTCAAAGATGTTTAAACTACAAAATAGAGACAAAGCACAAGAGAAGGATCCAGATGACAATTTCAATTTCTAGGACTTTGAGTGGGGGTGGCCAGGCACATAATCTGTTTCCTATGTATGTCATCTTAGGAAGACTAGTCTCTGACATTACAGTTGCTGAGTTCTCTGGTGTATATCGCTTCAATCGAGCTTGCCTCCTAACTAGCATCAATAGAGTGGAATGCAATTCTCAAGTTATAGCTAATTTCATCCTCCCTGAAATTAACAAGCTTGCTGTGGAGGCAAAGTCTGGGTCACTTGCTATATTATTTGTTAGCTGCGTTGGATCCGCAAATACTTTGTCAGAAGTTGATTCAGTTGATGAGCCTCCATACATGGAATCTGTTCCTGTTGCAGGTTGTTGCTTATGGGGCAAGATACCACTGGAATCACTTTACATTTCATGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCCGAGATAATGTCAACTGTTGATATGCGCTCTTGTGTCCTGAAGACAAGTTACCTTGATGGAGAGAAGTGTCTGGGATTTCAAGTTCCATATAATTCTGATTCTATGCATACAGCACAGCAAGTACAGGTCACAATTTCTGCAGAAGAGTTTGGTGCTAGGGATAAATCTCCGTATAATACATACACGTACAGTGAAATACCTTCATCTTCACTATCCCATTTGAATCGGTTGAGGGCAGGAAATGTTGTTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACTGAAGTAACTGAAGACTTCTCCTGTCCATTTTGCTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGATGTCACTTGTTATCATTACACGATCTCTTCAACTTTGAATTTTGGGTAACTGAAGAGTATCAAGCTGTGAATGTTTCCACGAAGACTGATGTTTGGCGGTCTGAGATCATCGCGGATGGCATTGATCCAAAGCAGCAGACATTCTTCTTCTGCTCAAGGCATCTCAGACGCAAAAAAGTTAAGAATGTAGCTCAAAGTGGAAACCACGTACATCCTATTGTTGTAGAGTCTGAATATTCAGACAAGGCGGACGATGCTCAATCTAGCAAAGGTGAAAAGGCTCAAATATCAGGGCATAATGTTGCGCCAACTATGCTTCAATTTGCCAAGACAAGAAAACTCTCGATTGAACGTGCAGACCCAAGACACTGTACCCTCTTAAGGAAGAGACAGTTCTTTCATTCCCACAGAGCTCAGCCCATGGCGCTGGAACAAGTGTTATCAGATCGAGATAGTGAAGATGAAGTAGATGATGATGTTGCTGATCTTGAAGATAGAAGGATGCTCGATGATTTTGTCGATGTAACAAAGGATGAGAAGCAAATGATGCATATGTGGAACTCATTTGTCAGGAAGCAACGGGTGCTGGCAGATGGGCATATCCCTTGGTGTTGTGAGGCATTTTCACAATTACATGGACCAAGCCTTGTCGAAACTCCAGCTCTTCTACGGTGCTGGAGATTGTTTATGATTAAGTTGTGGAACCATGGTCTACTTGATGCGAACTCCATGAACAATTGTAACATTATTCTTGACAGAATACATAGTGAAGCTTCTGATCCTAAAAGCTGA 1821 41.57 MPGIPLVTRETSCSRNADQMCRVESRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIRNPLFLQRCLNYKIETKHKRRIQMTISISRTLSGGGQAHNLFPMYVILGRLVSDITVAEFSGVYRFNRACLLTSINRVECNSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSANTLSEVDSVDEPPYMESVPVAGCCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTSYLDGEKCLGFQVPYNSDSMHTAQQVQVTISAEEFGARDKSPYNTYTYSEIPSSSLSHLNRLRAGNVVFNYRYYNNRLQKTEVTEDFSCPFCLVKCASFKGLRCHLLSLHDLFNFEFWVTEEYQAVNVSTKTDVWRSEIIADGIDPKQQTFFFCSRHLRRKKVKNVAQSGNHVHPIVVESEYSDKADDAQSSKGEKAQISGHNVAPTMLQFAKTRKLSIERADPRHCTLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWCCEAFSQLHGPSLVETPALLRCWRLFMIKLWNHGLLDANSMNNCNIILDRIHSEASDPKS 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9202622 9224733 + Sed0010479.5 Sed07g1238 720102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1238 606 Pfam VEFS-Box of polycomb protein 457 592 IPR019135 -
Sed07g1238 606 CDD ZnB-Zn_EMF2-like 301 375 - -
Sed07g1238 606 PANTHER POLYCOMB GROUP PROTEIN 1 605 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Sed07g1238 606 CDD VEFS-box_EMF2-like 470 597 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1234 Sed-Chr7:9202622 Sed07g1238 Sed-Chr7:9202622 0.00E+00 dispersed
Sed07g1236 Sed-Chr7:9202622 Sed07g1238 Sed-Chr7:9202622 0.00E+00 dispersed
Sed07g1238 Sed-Chr7:9202622 Sed13g0276 Sed-Chr13:1925578 5.60E-308 dispersed
Sed07g1237 Sed-Chr7:9202622 Sed07g1238 Sed-Chr7:9202622 0.00E+00 tandem
Sed07g1238 Sed-Chr7:9202622 Sed07g1239 Sed-Chr7:9202622 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1238 - - - 0.0