Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1239 ATGCCTGGCATACCACTCGTGACTCGCGAAACTTCCTGTTCCAGAAACGCAGATCAAATGTGCCGTGTAGAATCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTTTATTGCAAGCCGGTTGAACTCTATAATATTCTTCAACGCCGTGCTATTAGAAATCCATTGTTTCTTCAAAGATGTTTAAACTACAAAATAGAGACAAAGCACAAGAGAAGGATCCAGATGACAATTTCAATTTCTAGGACTTTGAGTGGGGGTGGCCAGGCACATAATCTGTTTCCTATGTATGTCATCTTAGGAAGACTAGTCTCTGACATTACAGTTGCTGAGTTCTCTGGTGTATATCGCTTCAATCGAGCTTGCCTCCTAACTAGCATCAATAGAGTGGAATGCAATTCTCAAGTTATAGCTAATTTCATCCTCCCTGAAATTAACAAGCTTGCTGTGGAGGCAAAGTCTGGGTCACTTGCTATATTATTTGTTAGCTGCGTTGGATCCGCAAATACTTTGTCAGAAGTTGATTCAGTTGATGAGCCTCCATACATGGAATCTGTTCCTGTTGCAGGTTGTTGCTTATGGGGCAAGATACCACTGGAATCACTTTACATTTCATGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCCGAGATAATGTCAACTGTTGATATGCGCTCTTGTGTCCTGAAGACAAGTTACCTTGATGGAGAGAAGTGTCTGGGATTTCAAGTTCCATATAATTCTGATTCTATGCATACAGCACAGCAAGTACAGGTCACAATTTCTGCAGAAGAGTTTGGTGCTAGGGATAAATCTCCGTATAATACATACACGTACAGTGAAATACCTTCATCTTCACTATCCCATTTGAATCGGTTGAGGGCAGGAAATGTTGTTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACTGAAGTAACTGAAGACTTCTCCTGTCCATTTTGCTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGATGTCACTTGTTATCATTACACGATCTCTTCAACTTTGAATTTTGGGTAACTGAAGAGTATCAAGCTGTGAATGTTTCCACGAAGACTGATGTTTGGCGGTCTGAGATCATCGCGGATGGCATTGATCCAAAGCAGCAGACATTCTTCTTCTGCTCAAGGCATCTCAGACGCAAAAAAGTTAAGAATGTAGCTCAAAGTGGAAACCACGTACATCCTATTGTTGTAGAGTCTGAATATTCAGACAAGGCGGACGATGCTCAATCTAGCAAAGGGCATAATGTTGCGCCAACTATGCTTCAATTTGCCAAGACAAGAAAACTCTCGATTGAACGTGCAGACCCAAGACACTGTACCCTCTTAAGGAAGAGACAGTTCTTTCATTCCCACAGAGCTCAGCCCATGGCGCTGGAACAAGTGTTATCAGATCGAGATAGTGAAGATGAAGTAGATGATGATGTTGCTGATCTTGAAGATAGAAGGATGCTCGATGATTTTGTCGATGTAACAAAGGATGAGAAGCAAATGATGCATATGTGGAACTCATTTGTCAGGAAGCAACGGGTGCTGGCAGATGGGCATATCCCTTGGTGTTGTGAGGCATTTTCACAATTACATGGACCAAGCCTTGTCGAAACTCCAGCTCTTCTACGGTGCTGGAGATTGTTTATGATTAAGTTGTGGAACCATGGTCTACTTGATGCGAACTCCATGAACAATTGTAACATTATTCTTGACAGAATACATAGTGAAGCTTCTGATCCTAAAAGCTGA 1800 41.61 MPGIPLVTRETSCSRNADQMCRVESRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIRNPLFLQRCLNYKIETKHKRRIQMTISISRTLSGGGQAHNLFPMYVILGRLVSDITVAEFSGVYRFNRACLLTSINRVECNSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSANTLSEVDSVDEPPYMESVPVAGCCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTSYLDGEKCLGFQVPYNSDSMHTAQQVQVTISAEEFGARDKSPYNTYTYSEIPSSSLSHLNRLRAGNVVFNYRYYNNRLQKTEVTEDFSCPFCLVKCASFKGLRCHLLSLHDLFNFEFWVTEEYQAVNVSTKTDVWRSEIIADGIDPKQQTFFFCSRHLRRKKVKNVAQSGNHVHPIVVESEYSDKADDAQSSKGHNVAPTMLQFAKTRKLSIERADPRHCTLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWCCEAFSQLHGPSLVETPALLRCWRLFMIKLWNHGLLDANSMNNCNIILDRIHSEASDPKS 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9202622 9224733 + Sed0010479.6 Sed07g1239 720103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1239 599 PANTHER POLYCOMB GROUP PROTEIN 1 598 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Sed07g1239 599 CDD ZnB-Zn_EMF2-like 301 375 - -
Sed07g1239 599 Pfam VEFS-Box of polycomb protein 450 585 IPR019135 -
Sed07g1239 599 CDD VEFS-box_EMF2-like 463 590 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1235 Sed-Chr7:9202622 Sed07g1239 Sed-Chr7:9202622 0.00E+00 dispersed
Sed07g1237 Sed-Chr7:9202622 Sed07g1239 Sed-Chr7:9202622 0.00E+00 dispersed
Sed07g1239 Sed-Chr7:9202622 Sed13g0276 Sed-Chr13:1925578 1.40E-303 dispersed
Sed07g1238 Sed-Chr7:9202622 Sed07g1239 Sed-Chr7:9202622 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1239 - - - 0.0