Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1324 ATGAAAACTGCTGAAATTTCCTTTGGAATTGGGACTCTGATGGGGTTTCGATTTCTGTTTCTGCTGTTTGGAATTTGTTTTCCTGTTAGCTCTTTCTCTATCTGTGAAGCTGCAGTCATCTTCCCTAGCGGGCAAAGCGAAGCACATTCTGTGCTCACAGACCATGCTGTCACTTCAACATCTCATGGCTTTGGCAGGAAACACCATAGCAAGTTTGATAATGCAGTTCCTAGCAAGCTGCCATTTAAAAGTTCATCTCTTTTGATCCACTCTCATTATAAAGCCATTCAATCAGACGATTCGAGTAGAGCTCCTAGCATTGCACTTCCACCTACAGCGCCTGATAAGAAATGGGTGCCTGATCATGCATTCTCACAATTGAACTCTTTTCACAAATCTTGCTGTTCAAGAAGGAAGTTTAGAAACAATGCTCCATGGCCTGCTTATCGTGCATCGCCCCCAGAAAGCGGCCAGCAAGGCCCTGCTGCTGTCTCTCCAATTCAGTCACCGTTACCATCTGCTGCGAGAGGAAGCTCGCCCGGACCTGCACCATCACCAGCGGTTCAATCCGACCACCATTATATCCCCATTCCTGCTCCTACAACTTCTCCTATGGGTTCTTACAAGAAGAGGAAGAAGAGCATGCCACCATCACAAGTTATGATGCTACCACCCCCACCTCCTAATGAGGAATGTGCAATATCATGTACAGAGCCACTTACCTATACGCCTCCTGGTGCACCGTGTGGTTGCGTGTGGCCAATTCAAGCCAAAATCAGCCTTGATGTTGCAATATACACATTTTTCCCTCTGGTTTCTGAGTTTGCAAAGGAAATTGCAGTTAGTCTCAGTCTGAACCATAGCCAAGTTCGAATTATGGGAGCTGATGCTGCTAGCCAGCAGTTGGATAAAACAACGGTCCTCGTCAACTTGGTACCGAGAGGATCGAAATTCAATCAAACCACAGCATATTCGATATATCAGAAATTTTGGCTGAGCAAAATATCCATCAACGCTTCTTTGTTTGGTAGATATCAAGTACTAAATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCGTTATCGACTTCAGGTATCTCATCCATTGATGATGGTTTGAACACTAGGAATACTAATGCTGGAAATGCTATAAAACCGTTCGGAGTTGACGTGCCAAAAAGTAGAAAAGAAGAGCTTAGTGGAAACATGATCGCGGTGATTACGATATCGTCGTTCACTGCCTTTGTAATGTGTGTTGGTCTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTCTGCACATCAACCATCACAAGCTCCACAAAACTTGATAGCCTCATCTACAAAACCATCAGGCACCGCTGAATTGATAATGGTTGAAAGTGAACCTGGCTCTTCATCAACACTTCGTGCTGCCGATCCTATGACGTATATAGGATCGGCAACGAACTTCACATTGAAAGGCATGGAGAAAGCCACAGACAACTTTGATGCTGCAAGAATATTAGGAGAAGGTGGTTTTGGAATTGTTTACAGTGGCAGTTTAGATGATGGAAAGGATGTGGCTGTGAAGGTTCTCAAAAGGCATAATCGACACGGTATTTGCGAATTCTTGGCAGAAGTCGAGATGCTGAGTCGTCTACACCATAGAAATCTTGTTAAGTTGATTGGTATCTGTACTGAAGATCAGATTCGTTGCCTCGTATATGAATTGGTTCCTAATGGAAGCGTTGAATCGCATTTACATGGCATTGACAAGTTAACTGGTCCTCTTGACTGGGATGCCCGCATGAAGATTGCCCTTGGTGCTGCTCGAGGCCTTGCCTATCTGCACGAAGACTCGAATCCTCGAGTCATTCATCGAGATTTCAAAGCTAGCAACATATTGTTGGAATATGACTTTACAGCAAAAGTTTCGGATTTTGGATTAGCTAGAACTGCATTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGATATCTAGCTCCAGAATACGCAATGACTGGCCATCTTCTTGTAAAGAGCGACGTCTACAGCTATGGTGTTGTTCTTCTCGAGTTAATTACAGGAAGAAAGCCAGTTGACTTGTCGCTTCCACCTGGGCAAGAAAATCTCGTTACTTGGGCTCGTCCGCTCCTCACGAGCAAGGAGGGGTTAGATGTCATAACAGACTCAGCTATTAAGTCTGATATCTCCATTGATAGCCTGGCCAGAGTAGCAGCAATTGCTTCAATGTGTGTGCAGCCCGAAGTGTCTCACAGACCGTTTATGGGCGAGGTAGTTCAAGCTCTAAAGCTTGTTTGCAGTGAATTTGAAGAGACTAATGAGCCCGGTTCACAAAGTTACAGCCGAGATGAACTTTTAAGTTACATGGATAGTAAATTTGGAGGGATTTCAGGTGAAATACTAAACACTGTGGAGACCTCACATTGGTTTCATTCGGAAAAGGCGACGAATGTAGGATTATCAGCCTCGGATTTGATCAGCACGTCTGCAAGATTTGAGGGACAGGAACTGGTGTCTTCGAGATGGTATTCATCAAACTCAGAACCGTTGAGAATGGGAAGAAAGAGGGAGATATGGCACAAGCTAAGAAGTTTGTCTCGAGGTAGCATCAGTGAACATGGCTTTTCTTCAAAGTTTTGGCCTGGATTTCGTTAG 2676 44.54 MKTAEISFGIGTLMGFRFLFLLFGICFPVSSFSICEAAVIFPSGQSEAHSVLTDHAVTSTSHGFGRKHHSKFDNAVPSKLPFKSSSLLIHSHYKAIQSDDSSRAPSIALPPTAPDKKWVPDHAFSQLNSFHKSCCSRRKFRNNAPWPAYRASPPESGQQGPAAVSPIQSPLPSAARGSSPGPAPSPAVQSDHHYIPIPAPTTSPMGSYKKRKKSMPPSQVMMLPPPPPNEECAISCTEPLTYTPPGAPCGCVWPIQAKISLDVAIYTFFPLVSEFAKEIAVSLSLNHSQVRIMGADAASQQLDKTTVLVNLVPRGSKFNQTTAYSIYQKFWLSKISINASLFGRYQVLNVKYPGLPPSPPLSTSGISSIDDGLNTRNTNAGNAIKPFGVDVPKSRKEELSGNMIAVITISSFTAFVMCVGLAWLCLLRCRVSAHQPSQAPQNLIASSTKPSGTAELIMVESEPGSSSTLRAADPMTYIGSATNFTLKGMEKATDNFDAARILGEGGFGIVYSGSLDDGKDVAVKVLKRHNRHGICEFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTAKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELITGRKPVDLSLPPGQENLVTWARPLLTSKEGLDVITDSAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCSEFEETNEPGSQSYSRDELLSYMDSKFGGISGEILNTVETSHWFHSEKATNVGLSASDLISTSARFEGQELVSSRWYSSNSEPLRMGRKREIWHKLRSLSRGSISEHGFSSKFWPGFR 891
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10123823 10129042 + Sed0023340.1 Sed07g1324 720188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1324 891 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 472 571 - -
Sed07g1324 891 SUPERFAMILY Protein kinase-like (PK-like) 472 769 IPR011009 -
Sed07g1324 891 MobiDBLite consensus disorder prediction 146 219 - -
Sed07g1324 891 FunFam Receptor-like serine/threonine-protein kinase ALE2 572 790 - -
Sed07g1324 891 PANTHER OS01G0750732 PROTEIN 233 791 IPR050885 -
Sed07g1324 891 Gene3D Transferase(Phosphotransferase) domain 1 572 791 - -
Sed07g1324 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1324 891 Gene3D Phosphorylase Kinase; domain 1 468 571 - -
Sed07g1324 891 MobiDBLite consensus disorder prediction 158 175 - -
Sed07g1324 891 Pfam Protein tyrosine and serine/threonine kinase 499 769 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1324 891 ProSiteProfiles Protein kinase domain profile. 496 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1324 891 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524(InterPro)
Sed07g1324 891 CDD STKc_IRAK 502 770 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g1269 Sed-Chr5:23643878 Sed07g1324 Sed-Chr7:10123823 9.90E-102 dispersed
Sed07g1324 Sed-Chr7:10123823 Sed07g1326 Sed-Chr7:10123823 0.00E+00 dispersed
Sed07g1324 Sed-Chr7:10123823 Sed07g1325 Sed-Chr7:10123823 0.00E+00 tandem
Sed06g0088 Sed-Chr6:549039 Sed07g1324 Sed-Chr7:10123823 1.30E-67 wgd
Sed06g2213 Sed-Chr6:45811306 Sed07g1324 Sed-Chr7:10123823 4.30E-68 wgd
Sed07g1324 Sed-Chr7:10123823 Sed09g1684 Sed-Chr9:40185063 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79460 PF07714 PK_Tyr_Ser-Thr 2.90E-47 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1324 - - - 0.0