Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g1324 | ATGAAAACTGCTGAAATTTCCTTTGGAATTGGGACTCTGATGGGGTTTCGATTTCTGTTTCTGCTGTTTGGAATTTGTTTTCCTGTTAGCTCTTTCTCTATCTGTGAAGCTGCAGTCATCTTCCCTAGCGGGCAAAGCGAAGCACATTCTGTGCTCACAGACCATGCTGTCACTTCAACATCTCATGGCTTTGGCAGGAAACACCATAGCAAGTTTGATAATGCAGTTCCTAGCAAGCTGCCATTTAAAAGTTCATCTCTTTTGATCCACTCTCATTATAAAGCCATTCAATCAGACGATTCGAGTAGAGCTCCTAGCATTGCACTTCCACCTACAGCGCCTGATAAGAAATGGGTGCCTGATCATGCATTCTCACAATTGAACTCTTTTCACAAATCTTGCTGTTCAAGAAGGAAGTTTAGAAACAATGCTCCATGGCCTGCTTATCGTGCATCGCCCCCAGAAAGCGGCCAGCAAGGCCCTGCTGCTGTCTCTCCAATTCAGTCACCGTTACCATCTGCTGCGAGAGGAAGCTCGCCCGGACCTGCACCATCACCAGCGGTTCAATCCGACCACCATTATATCCCCATTCCTGCTCCTACAACTTCTCCTATGGGTTCTTACAAGAAGAGGAAGAAGAGCATGCCACCATCACAAGTTATGATGCTACCACCCCCACCTCCTAATGAGGAATGTGCAATATCATGTACAGAGCCACTTACCTATACGCCTCCTGGTGCACCGTGTGGTTGCGTGTGGCCAATTCAAGCCAAAATCAGCCTTGATGTTGCAATATACACATTTTTCCCTCTGGTTTCTGAGTTTGCAAAGGAAATTGCAGTTAGTCTCAGTCTGAACCATAGCCAAGTTCGAATTATGGGAGCTGATGCTGCTAGCCAGCAGTTGGATAAAACAACGGTCCTCGTCAACTTGGTACCGAGAGGATCGAAATTCAATCAAACCACAGCATATTCGATATATCAGAAATTTTGGCTGAGCAAAATATCCATCAACGCTTCTTTGTTTGGTAGATATCAAGTACTAAATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCGTTATCGACTTCAGGTATCTCATCCATTGATGATGGTTTGAACACTAGGAATACTAATGCTGGAAATGCTATAAAACCGTTCGGAGTTGACGTGCCAAAAAGTAGAAAAGAAGAGCTTAGTGGAAACATGATCGCGGTGATTACGATATCGTCGTTCACTGCCTTTGTAATGTGTGTTGGTCTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTCTGCACATCAACCATCACAAGCTCCACAAAACTTGATAGCCTCATCTACAAAACCATCAGGCACCGCTGAATTGATAATGGTTGAAAGTGAACCTGGCTCTTCATCAACACTTCGTGCTGCCGATCCTATGACGTATATAGGATCGGCAACGAACTTCACATTGAAAGGCATGGAGAAAGCCACAGACAACTTTGATGCTGCAAGAATATTAGGAGAAGGTGGTTTTGGAATTGTTTACAGTGGCAGTTTAGATGATGGAAAGGATGTGGCTGTGAAGGTTCTCAAAAGGCATAATCGACACGGTATTTGCGAATTCTTGGCAGAAGTCGAGATGCTGAGTCGTCTACACCATAGAAATCTTGTTAAGTTGATTGGTATCTGTACTGAAGATCAGATTCGTTGCCTCGTATATGAATTGGTTCCTAATGGAAGCGTTGAATCGCATTTACATGGCATTGACAAGTTAACTGGTCCTCTTGACTGGGATGCCCGCATGAAGATTGCCCTTGGTGCTGCTCGAGGCCTTGCCTATCTGCACGAAGACTCGAATCCTCGAGTCATTCATCGAGATTTCAAAGCTAGCAACATATTGTTGGAATATGACTTTACAGCAAAAGTTTCGGATTTTGGATTAGCTAGAACTGCATTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGATATCTAGCTCCAGAATACGCAATGACTGGCCATCTTCTTGTAAAGAGCGACGTCTACAGCTATGGTGTTGTTCTTCTCGAGTTAATTACAGGAAGAAAGCCAGTTGACTTGTCGCTTCCACCTGGGCAAGAAAATCTCGTTACTTGGGCTCGTCCGCTCCTCACGAGCAAGGAGGGGTTAGATGTCATAACAGACTCAGCTATTAAGTCTGATATCTCCATTGATAGCCTGGCCAGAGTAGCAGCAATTGCTTCAATGTGTGTGCAGCCCGAAGTGTCTCACAGACCGTTTATGGGCGAGGTAGTTCAAGCTCTAAAGCTTGTTTGCAGTGAATTTGAAGAGACTAATGAGCCCGGTTCACAAAGTTACAGCCGAGATGAACTTTTAAGTTACATGGATAGTAAATTTGGAGGGATTTCAGGTGAAATACTAAACACTGTGGAGACCTCACATTGGTTTCATTCGGAAAAGGCGACGAATGTAGGATTATCAGCCTCGGATTTGATCAGCACGTCTGCAAGATTTGAGGGACAGGAACTGGTGTCTTCGAGATGGTATTCATCAAACTCAGAACCGTTGAGAATGGGAAGAAAGAGGGAGATATGGCACAAGCTAAGAAGTTTGTCTCGAGGTAGCATCAGTGAACATGGCTTTTCTTCAAAGTTTTGGCCTGGATTTCGTTAG | 2676 | 44.54 | MKTAEISFGIGTLMGFRFLFLLFGICFPVSSFSICEAAVIFPSGQSEAHSVLTDHAVTSTSHGFGRKHHSKFDNAVPSKLPFKSSSLLIHSHYKAIQSDDSSRAPSIALPPTAPDKKWVPDHAFSQLNSFHKSCCSRRKFRNNAPWPAYRASPPESGQQGPAAVSPIQSPLPSAARGSSPGPAPSPAVQSDHHYIPIPAPTTSPMGSYKKRKKSMPPSQVMMLPPPPPNEECAISCTEPLTYTPPGAPCGCVWPIQAKISLDVAIYTFFPLVSEFAKEIAVSLSLNHSQVRIMGADAASQQLDKTTVLVNLVPRGSKFNQTTAYSIYQKFWLSKISINASLFGRYQVLNVKYPGLPPSPPLSTSGISSIDDGLNTRNTNAGNAIKPFGVDVPKSRKEELSGNMIAVITISSFTAFVMCVGLAWLCLLRCRVSAHQPSQAPQNLIASSTKPSGTAELIMVESEPGSSSTLRAADPMTYIGSATNFTLKGMEKATDNFDAARILGEGGFGIVYSGSLDDGKDVAVKVLKRHNRHGICEFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTAKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELITGRKPVDLSLPPGQENLVTWARPLLTSKEGLDVITDSAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCSEFEETNEPGSQSYSRDELLSYMDSKFGGISGEILNTVETSHWFHSEKATNVGLSASDLISTSARFEGQELVSSRWYSSNSEPLRMGRKREIWHKLRSLSRGSISEHGFSSKFWPGFR | 891 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 10123823 | 10129042 | + | Sed0023340.1 | Sed07g1324 | 720188 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g1324 | 891 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 472 | 571 | - | - | |
Sed07g1324 | 891 | SUPERFAMILY | Protein kinase-like (PK-like) | 472 | 769 | IPR011009 | - | |
Sed07g1324 | 891 | MobiDBLite | consensus disorder prediction | 146 | 219 | - | - | |
Sed07g1324 | 891 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 572 | 790 | - | - | |
Sed07g1324 | 891 | PANTHER | OS01G0750732 PROTEIN | 233 | 791 | IPR050885 | - | |
Sed07g1324 | 891 | Gene3D | Transferase(Phosphotransferase) domain 1 | 572 | 791 | - | - | |
Sed07g1324 | 891 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 618 | 630 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed07g1324 | 891 | Gene3D | Phosphorylase Kinase; domain 1 | 468 | 571 | - | - | |
Sed07g1324 | 891 | MobiDBLite | consensus disorder prediction | 158 | 175 | - | - | |
Sed07g1324 | 891 | Pfam | Protein tyrosine and serine/threonine kinase | 499 | 769 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed07g1324 | 891 | ProSiteProfiles | Protein kinase domain profile. | 496 | 772 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed07g1324 | 891 | ProSitePatterns | Protein kinases ATP-binding region signature. | 502 | 524 | IPR017441 | GO:0005524(InterPro) | |
Sed07g1324 | 891 | CDD | STKc_IRAK | 502 | 770 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed05g1269 | Sed-Chr5:23643878 | Sed07g1324 | Sed-Chr7:10123823 | 9.90E-102 | dispersed | |
Sed07g1324 | Sed-Chr7:10123823 | Sed07g1326 | Sed-Chr7:10123823 | 0.00E+00 | dispersed | |
Sed07g1324 | Sed-Chr7:10123823 | Sed07g1325 | Sed-Chr7:10123823 | 0.00E+00 | tandem | |
Sed06g0088 | Sed-Chr6:549039 | Sed07g1324 | Sed-Chr7:10123823 | 1.30E-67 | wgd | |
Sed06g2213 | Sed-Chr6:45811306 | Sed07g1324 | Sed-Chr7:10123823 | 4.30E-68 | wgd | |
Sed07g1324 | Sed-Chr7:10123823 | Sed09g1684 | Sed-Chr9:40185063 | 0.00E+00 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
79460 | PF07714 | PK_Tyr_Ser-Thr | 2.90E-47 | CL0016 | Sed | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g1324 | - | - | - | 0.0 |