Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1325 ATGAAAACTGCTGAAATTTCCTTTGGAATTGGGACTCTGATGGGGTTTCGATTTCTGTTTCTGCTGTTTGGAATTTGTTTTCCTGTTAGCTCTTTCTCTATCTGTGAAGCTGCAGTCATCTTCCCTAGCGGGCAAAGCGAAGCACATTCTGTGCTCACAGACCATGCTGTCACTTCAACATCTCATGGCTTTGGCAGGAAACACCATAGCAAGTTTGATAATGCAGTTCCTAGCAAGCTGCCATTTAAAAGTTCATCTCTTTTGATCCACTCTCATTATAAAGCCATTCAATCAGACGATTCGAGTAGAGCTCCTAGCATTGCACTTCCACCTACAGCGCCTGATAAGAAATGGGTGCCTGATCATGCATTCTCACAATTGAACTCTTTTCACAAATCTTGCTGTTCAAGAAGGAAGTTTAGAAACAATGCTCCATGGCCTGCTTATCGTGCATCGCCCCCAGAAAGCGGCCAGCAAGGCCCTGCTGCTGTCTCTCCAATTCAGTCACCGTTACCATCTGCTGCGAGAGGAAGCTCGCCCGGACCTGCACCATCACCAGCGGTTCAATCCGACCACCATTATATCCCCATTCCTGCTCCTACAACTTCTCCTATGGGTTCTTACAAGAAGAGGAAGAAGAGCATGCCACCATCACAAGTTATGATGCTACCACCCCCACCTCCTAATGAGGAATGTGCAATATCATGTACAGAGCCACTTACCTATACGCCTCCTGGTGCACCGTGTGGTTGCGTGTGGCCAATTCAAGCCAAAATCAGCCTTGATGTTGCAATATACACATTTTTCCCTCTGGTTTCTGAGTTTGCAAAGGAAATTGCAGTTAGTCTCAGTCTGAACCATAGCCAAGTTCGAATTATGGGAGCTGATGCTGCTAGCCAGCAGTTGGATAAAACAACGGTCCTCGTCAACTTGGTACCGAGAGGATCGAAATTCAATCAAACCACAGCATATTCGATATATCAGAAATTTTGGCTGAGCAAAATATCCATCAACGCTTCTTTGTTTGGTAGATATCAAGTACTAAATGTCAAATATCCAGGTATCTCATCCATTGATGATGGTTTGAACACTAGGAATACTAATGCTGGAAATGCTATAAAACCGTTCGGAGTTGACGTGCCAAAAAGTAGAAAAGAAGAGCTTAGTGGAAACATGATCGCGGTGATTACGATATCGTCGTTCACTGCCTTTGTAATGTGTGTTGGTCTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTCTGCACATCAACCATCACAAGCTCCACAAAACTTGATAGCCTCATCTACAAAACCATCAGGCACCGCTGAATTGATAATGGTTGAAAGTGAACCTGGCTCTTCATCAACACTTCGTGCTGCCGATCCTATGACGTATATAGGATCGGCAACGAACTTCACATTGAAAGGCATGGAGAAAGCCACAGACAACTTTGATGCTGCAAGAATATTAGGAGAAGGTGGTTTTGGAATTGTTTACAGTGGCAGTTTAGATGATGGAAAGGATGTGGCTGTGAAGGTTCTCAAAAGGCATAATCGACACGGTATTTGCGAATTCTTGGCAGAAGTCGAGATGCTGAGTCGTCTACACCATAGAAATCTTGTTAAGTTGATTGGTATCTGTACTGAAGATCAGATTCGTTGCCTCGTATATGAATTGGTTCCTAATGGAAGCGTTGAATCGCATTTACATGGCATTGACAAGTTAACTGGTCCTCTTGACTGGGATGCCCGCATGAAGATTGCCCTTGGTGCTGCTCGAGGCCTTGCCTATCTGCACGAAGACTCGAATCCTCGAGTCATTCATCGAGATTTCAAAGCTAGCAACATATTGTTGGAATATGACTTTACAGCAAAAGTTTCGGATTTTGGATTAGCTAGAACTGCATTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGATATCTAGCTCCAGAATACGCAATGACTGGCCATCTTCTTGTAAAGAGCGACGTCTACAGCTATGGTGTTGTTCTTCTCGAGTTAATTACAGGAAGAAAGCCAGTTGACTTGTCGCTTCCACCTGGGCAAGAAAATCTCGTTACTTGGGCTCGTCCGCTCCTCACGAGCAAGGAGGGGTTAGATGTCATAACAGACTCAGCTATTAAGTCTGATATCTCCATTGATAGCCTGGCCAGAGTAGCAGCAATTGCTTCAATGTGTGTGCAGCCCGAAGTGTCTCACAGACCGTTTATGGGCGAGGTAGTTCAAGCTCTAAAGCTTGTTTGCAGTGAATTTGAAGAGACTAATGAGCCCGGTTCACAAAGTTACAGCCGAGATGAACTTTTAAGTTACATGGATAGTAAATTTGGAGGGATTTCAGGTGAAATACTAAACACTGTGGAGACCTCACATTGGTTTCATTCGGAAAAGGCGACGAATGTAGGATTATCAGCCTCGGATTTGATCAGCACGTCTGCAAGATTTGAGGGACAGGAACTGGTGTCTTCGAGATGGTATTCATCAAACTCAGAACCGTTGAGAATGGGAAGAAAGAGGGAGATATGGCACAAGCTAAGAAGTTTGTCTCGAGGTAGCATCAGTGAACATGGCTTTTCTTCAAAGTTTTGGCCTGGATTTCGTTAG 2643 44.42 MKTAEISFGIGTLMGFRFLFLLFGICFPVSSFSICEAAVIFPSGQSEAHSVLTDHAVTSTSHGFGRKHHSKFDNAVPSKLPFKSSSLLIHSHYKAIQSDDSSRAPSIALPPTAPDKKWVPDHAFSQLNSFHKSCCSRRKFRNNAPWPAYRASPPESGQQGPAAVSPIQSPLPSAARGSSPGPAPSPAVQSDHHYIPIPAPTTSPMGSYKKRKKSMPPSQVMMLPPPPPNEECAISCTEPLTYTPPGAPCGCVWPIQAKISLDVAIYTFFPLVSEFAKEIAVSLSLNHSQVRIMGADAASQQLDKTTVLVNLVPRGSKFNQTTAYSIYQKFWLSKISINASLFGRYQVLNVKYPGISSIDDGLNTRNTNAGNAIKPFGVDVPKSRKEELSGNMIAVITISSFTAFVMCVGLAWLCLLRCRVSAHQPSQAPQNLIASSTKPSGTAELIMVESEPGSSSTLRAADPMTYIGSATNFTLKGMEKATDNFDAARILGEGGFGIVYSGSLDDGKDVAVKVLKRHNRHGICEFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTAKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELITGRKPVDLSLPPGQENLVTWARPLLTSKEGLDVITDSAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCSEFEETNEPGSQSYSRDELLSYMDSKFGGISGEILNTVETSHWFHSEKATNVGLSASDLISTSARFEGQELVSSRWYSSNSEPLRMGRKREIWHKLRSLSRGSISEHGFSSKFWPGFR 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10123823 10129042 + Sed0023340.2 Sed07g1325 720189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1325 880 Gene3D Transferase(Phosphotransferase) domain 1 561 780 - -
Sed07g1325 880 MobiDBLite consensus disorder prediction 146 219 - -
Sed07g1325 880 FunFam Receptor-like serine/threonine-protein kinase ALE2 561 779 - -
Sed07g1325 880 Gene3D Phosphorylase Kinase; domain 1 457 560 - -
Sed07g1325 880 CDD STKc_IRAK 491 759 - -
Sed07g1325 880 Pfam Protein tyrosine and serine/threonine kinase 488 758 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1325 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1325 880 ProSiteProfiles Protein kinase domain profile. 485 761 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1325 880 MobiDBLite consensus disorder prediction 158 175 - -
Sed07g1325 880 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 461 560 - -
Sed07g1325 880 SUPERFAMILY Protein kinase-like (PK-like) 461 758 IPR011009 -
Sed07g1325 880 ProSitePatterns Protein kinases ATP-binding region signature. 491 513 IPR017441 GO:0005524(InterPro)
Sed07g1325 880 PANTHER OS01G0750732 PROTEIN 233 780 IPR050885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1325 Sed-Chr7:10123823 Sed09g1684 Sed-Chr9:40185063 0.00E+00 dispersed
Sed07g1324 Sed-Chr7:10123823 Sed07g1325 Sed-Chr7:10123823 0.00E+00 tandem
Sed07g1325 Sed-Chr7:10123823 Sed07g1326 Sed-Chr7:10123823 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79461 PF07714 PK_Tyr_Ser-Thr 2.80E-47 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1325 - - - 0.0