Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1326 ATGAAAACTGCTGAAATTTCCTTTGGAATTGGGACTCTGATGGGGTTTCGATTTCTGTTTCTGCTGTTTGGAATTTGTTTTCCTGTTAGCTCTTTCTCTATCTGTGAAGCTGCAGTCATCTTCCCTAGCGGGCAAAGCGAAGCACATTCTGTGCTCACAGACCATGCTGTCACTTCAACATCTCATGGCTTTGGCAGGAAACACCATAGCAAGTTTGATAATGCAGTTCCTAGCAAGCTGCCATTTAAAAGTTCATCTCTTTTGATCCACTCTCATTATAAAGCCATTCAATCAGACGATTCGAGTAGAGCTCCTAGCATTGCACTTCCACCTACAGCGCCTGATAAGAAATGGGTGCCTGATCATGCATTCTCACAATTGAACTCTTTTCACAAATCTTGCTGTTCAAGAAGGAAGTTTAGAAACAATGCTCCATGGCCTGCTTATCGTGCATCGCCCCCAGAAAGCGGCCAGCAAGGCCCTGCTGCTGTCTCTCCAATTCAGTCACCGTTACCATCTGCTGCGAGAGGAAGCTCGCCCGGACCTGCACCATCACCAGCGGTTCAATCCGACCACCATTATATCCCCATTCCTGCTCCTACAACTTCTCCTATGGGTTCTTACAAGAAGAGGAAGAAGAGCATGCCACCATCACAAGTTATGATGCTACCACCCCCACCTCCTAATGAGGAATGTGCAATATCATGTACAGAGCCACTTACCTATACGCCTCCTGGTGCACCGTGTGGTTGCGTGTGGCCAATTCAAGCCAAAATCAGCCTTGATGTTGCAATATACACATTTTTCCCTCTGGTTTCTGAGTTTGCAAAGGAAATTGCAGTTAGTCTCAGTCTGAACCATAGCCAAGTTCGAATTATGGGAGCTGATGCTGCTAGCCAGCAGTTGGATAAAACAACGGTCCTCGTCAACTTGGTACCGAGAGGATCGAAATTCAATCAAACCACAGCATATTCGATATATCAGAAATTTTGGCTGAGCAAAATATCCATCAACGCTTCTTTGTTTGGTAGATATCAAGTACTAAATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCGTTATCGACTTCAGGTATCTCATCCATTGATGATGGTTTGAACACTAGGAATACTAATGCTGGAAATGCTATAAAACCGTTCGGAGTTGACGTGCCAAAAAGTAGAAAAGAAGAGCTTAGTGGAAACATGATCGCGGTGATTACGATATCGTCGTTCACTGCCTTTGTAATGTGTGTTGGTCTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTCTGCACATCAACCATCACAAGCTCCACAAAACTTGATAGCCTCATCTACAAAACCATCAGTAATTTCTACAGGCACCGCTGAATTGATAATGGTTGAAAGTGAACCTGGCTCTTCATCAACACTTCGTGCTGCCGATCCTATGACGTATATAGGATCGGCAACGAACTTCACATTGAAAGGCATGGAGAAAGCCACAGACAACTTTGATGCTGCAAGAATATTAGGAGAAGGTGGTTTTGGAATTGTTTACAGTGGCAGTTTAGATGATGGAAAGGATGTGGCTGTGAAGGTTCTCAAAAGGCATAATCGACACGGTATTTGCGAATTCTTGGCAGAAGTCGAGATGCTGAGTCGTCTACACCATAGAAATCTTGTTAAGTTGATTGGTATCTGTACTGAAGATCAGATTCGTTGCCTCGTATATGAATTGGTTCCTAATGGAAGCGTTGAATCGCATTTACATGGCATTGACAAGTTAACTGGTCCTCTTGACTGGGATGCCCGCATGAAGATTGCCCTTGGTGCTGCTCGAGGCCTTGCCTATCTGCACGAAGACTCGAATCCTCGAGTCATTCATCGAGATTTCAAAGCTAGCAACATATTGTTGGAATATGACTTTACAGCAAAAGTTTCGGATTTTGGATTAGCTAGAACTGCATTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGATATCTAGCTCCAGAATACGCAATGACTGGCCATCTTCTTGTAAAGAGCGACGTCTACAGCTATGGTGTTGTTCTTCTCGAGTTAATTACAGGAAGAAAGCCAGTTGACTTGTCGCTTCCACCTGGGCAAGAAAATCTCGTTACTTGGGCTCGTCCGCTCCTCACGAGCAAGGAGGGGTTAGATGTCATAACAGACTCAGCTATTAAGTCTGATATCTCCATTGATAGCCTGGCCAGAGTAGCAGCAATTGCTTCAATGTGTGTGCAGCCCGAAGTGTCTCACAGACCGTTTATGGGCGAGGTAGTTCAAGCTCTAAAGCTTGTTTGCAGTGAATTTGAAGAGACTAATGAGCCCGGTTCACAAAGTTACAGCCGAGATGAACTTTTAAGTTACATGGATAGTAAATTTGGAGGGATTTCAGGTGAAATACTAAACACTGTGGAGACCTCACATTGGTTTCATTCGGAAAAGGCGACGAATGTAGGATTATCAGCCTCGGATTTGATCAGCACGTCTGCAAGATTTGAGGGACAGGAACTGGTGTCTTCGAGATGGTATTCATCAAACTCAGAACCGTTGAGAATGGGAAGAAAGAGGGAGATATGGCACAAGCTAAGAAGTTTGTCTCGAGGTAGCATCAGTGAACATGGCTTTTCTTCAAAGTTTTGGCCTGGATTTCGTTAG 2688 44.46 MKTAEISFGIGTLMGFRFLFLLFGICFPVSSFSICEAAVIFPSGQSEAHSVLTDHAVTSTSHGFGRKHHSKFDNAVPSKLPFKSSSLLIHSHYKAIQSDDSSRAPSIALPPTAPDKKWVPDHAFSQLNSFHKSCCSRRKFRNNAPWPAYRASPPESGQQGPAAVSPIQSPLPSAARGSSPGPAPSPAVQSDHHYIPIPAPTTSPMGSYKKRKKSMPPSQVMMLPPPPPNEECAISCTEPLTYTPPGAPCGCVWPIQAKISLDVAIYTFFPLVSEFAKEIAVSLSLNHSQVRIMGADAASQQLDKTTVLVNLVPRGSKFNQTTAYSIYQKFWLSKISINASLFGRYQVLNVKYPGLPPSPPLSTSGISSIDDGLNTRNTNAGNAIKPFGVDVPKSRKEELSGNMIAVITISSFTAFVMCVGLAWLCLLRCRVSAHQPSQAPQNLIASSTKPSVISTGTAELIMVESEPGSSSTLRAADPMTYIGSATNFTLKGMEKATDNFDAARILGEGGFGIVYSGSLDDGKDVAVKVLKRHNRHGICEFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTAKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELITGRKPVDLSLPPGQENLVTWARPLLTSKEGLDVITDSAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCSEFEETNEPGSQSYSRDELLSYMDSKFGGISGEILNTVETSHWFHSEKATNVGLSASDLISTSARFEGQELVSSRWYSSNSEPLRMGRKREIWHKLRSLSRGSISEHGFSSKFWPGFR 895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10123823 10129042 + Sed0023340.3 Sed07g1326 720190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1326 895 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524(InterPro)
Sed07g1326 895 MobiDBLite consensus disorder prediction 146 219 - -
Sed07g1326 895 SUPERFAMILY Protein kinase-like (PK-like) 476 773 IPR011009 -
Sed07g1326 895 CDD STKc_IRAK 506 774 - -
Sed07g1326 895 FunFam Receptor-like serine/threonine-protein kinase ALE2 576 794 - -
Sed07g1326 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1326 895 Pfam Protein tyrosine and serine/threonine kinase 503 773 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1326 895 PANTHER OS01G0750732 PROTEIN 233 795 IPR050885 -
Sed07g1326 895 Gene3D Transferase(Phosphotransferase) domain 1 576 795 - -
Sed07g1326 895 MobiDBLite consensus disorder prediction 158 175 - -
Sed07g1326 895 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 476 575 - -
Sed07g1326 895 ProSiteProfiles Protein kinase domain profile. 500 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1326 895 Gene3D Phosphorylase Kinase; domain 1 472 575 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1324 Sed-Chr7:10123823 Sed07g1326 Sed-Chr7:10123823 0.00E+00 dispersed
Sed07g1326 Sed-Chr7:10123823 Sed09g1684 Sed-Chr9:40185063 0.00E+00 dispersed
Sed07g1325 Sed-Chr7:10123823 Sed07g1326 Sed-Chr7:10123823 0.00E+00 tandem
Sed07g1326 Sed-Chr7:10123823 Sed07g1327 Sed-Chr7:10125157 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79462 PF07714 PK_Tyr_Ser-Thr 2.90E-47 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1326 - - - 0.0