Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g1329 | ATGGGTTCTTACAAGAAGAGGAAGAAGAGCATGCCACCATCACAAGTTATGATGCTACCACCCCCACCTCCTAATGAGGAATGTGCAATATCATGTACAGAGCCACTTACCTATACGCCTCCTGGTGCACCGTGTGGTTGCGTGTGGCCAATTCAAGCCAAAATCAGCCTTGATGTTGCAATATACACATTTTTCCCTCTGGTTTCTGAGTTTGCAAAGGAAATTGCAGTTAGTCTCAGTCTGAACCATAGCCAAGTTCGAATTATGGGAGCTGATGCTGCTAGCCAGCAGTTGGATAAAACAACGGTCCTCGTCAACTTGGTACCGAGAGGATCGAAATTCAATCAAACCACAGCATATTCGATATATCAGAAATTTTGGCTGAGCAAAATATCCATCAACGCTTCTTTGTTTGGTAGATATCAAGTACTAAATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCGTTATCGACTTCAGGTATCTCATCCATTGATGATGGTTTGAACACTAGGAATACTAATGCTGGAAATGCTATAAAACCGTTCGGAGTTGACGTGCCAAAAAGTAGAAAAGAAGAGCTTAGTGGAAACATGATCGCGGTGATTACGATATCGTCGTTCACTGCCTTTGTAATGTGTGTTGGTCTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTCTGCACATCAACCATCACAAGCTCCACAAAACTTGATAGCCTCATCTACAAAACCATCAGGCACCGCTGAATTGATAATGGTTGAAAGTGAACCTGGCTCTTCATCAACACTTCGTGCTGCCGATCCTATGACGTATATAGGATCGGCAACGAACTTCACATTGAAAGGCATGGAGAAAGCCACAGACAACTTTGATGCTGCAAGAATATTAGGAGAAGGTGGTTTTGGAATTGTTTACAGTGGCAGTTTAGATGATGGAAAGGATGTGGCTGTGAAGGTTCTCAAAAGGCATAATCGACACGGTATTTGCGAATTCTTGGCAGAAGTCGAGATGCTGAGTCGTCTACACCATAGAAATCTTGTTAAGTTGATTGGTATCTGTACTGAAGATCAGATTCGTTGCCTCGTATATGAATTGGTTCCTAATGGAAGCGTTGAATCGCATTTACATGGCATTGACAAGTTAACTGGTCCTCTTGACTGGGATGCCCGCATGAAGATTGCCCTTGGTGCTGCTCGAGGCCTTGCCTATCTGCACGAAGACTCGAATCCTCGAGTCATTCATCGAGATTTCAAAGCTAGCAACATATTGTTGGAATATGACTTTACAGCAAAAGTTTCGGATTTTGGATTAGCTAGAACTGCATTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGATATCTAGCTCCAGAATACGCAATGACTGGCCATCTTCTTGTAAAGAGCGACGTCTACAGCTATGGTGTTGTTCTTCTCGAGTTAATTACAGGAAGAAAGCCAGTTGACTTGTCGCTTCCACCTGGGCAAGAAAATCTCGTTACTTGGGCTCGTCCGCTCCTCACGAGCAAGGAGGGGTTAGATGTCATAACAGACTCAGCTATTAAGTCTGATATCTCCATTGATAGCCTGGCCAGAGTAGCAGCAATTGCTTCAATGTGTGTGCAGCCCGAAGTGTCTCACAGACCGTTTATGGGCGAGGTAGTTCAAGCTCTAAAGCTTGTTTGCAGTGAATTTGAAGAGACTAATGAGCCCGGTTCACAAAGTTACAGCCGAGATGAACTTTTAAGTTACATGGATAGTAAATTTGGAGGGATTTCAGGTGAAATACTAAACACTGTGGAGACCTCACATTGGTTTCATTCGGAAAAGGCGACGAATGTAGGATTATCAGCCTCGGATTTGATCAGCACGTCTGCAAGATTTGAGGGACAGGAACTGGTGTCTTCGAGATGGTATTCATCAAACTCAGAACCGTTGAGAATGGGAAGAAAGAGGGAGATATGGCACAAGCTAAGAAGTTTGTCTCGAGGTAGCATCAGTGAACATGGCTTTTCTTCAAAGTTTTGGCCTGGATTTCGTTAG | 2064 | 43.9 | MGSYKKRKKSMPPSQVMMLPPPPPNEECAISCTEPLTYTPPGAPCGCVWPIQAKISLDVAIYTFFPLVSEFAKEIAVSLSLNHSQVRIMGADAASQQLDKTTVLVNLVPRGSKFNQTTAYSIYQKFWLSKISINASLFGRYQVLNVKYPGLPPSPPLSTSGISSIDDGLNTRNTNAGNAIKPFGVDVPKSRKEELSGNMIAVITISSFTAFVMCVGLAWLCLLRCRVSAHQPSQAPQNLIASSTKPSGTAELIMVESEPGSSSTLRAADPMTYIGSATNFTLKGMEKATDNFDAARILGEGGFGIVYSGSLDDGKDVAVKVLKRHNRHGICEFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTAKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELITGRKPVDLSLPPGQENLVTWARPLLTSKEGLDVITDSAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCSEFEETNEPGSQSYSRDELLSYMDSKFGGISGEILNTVETSHWFHSEKATNVGLSASDLISTSARFEGQELVSSRWYSSNSEPLRMGRKREIWHKLRSLSRGSISEHGFSSKFWPGFR | 687 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 10125157 | 10129042 | + | Sed0023340.6 | Sed07g1329 | 720193 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g1329 | 687 | Pfam | Protein tyrosine and serine/threonine kinase | 295 | 565 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed07g1329 | 687 | CDD | STKc_IRAK | 298 | 566 | - | - | |
Sed07g1329 | 687 | Gene3D | Transferase(Phosphotransferase) domain 1 | 368 | 587 | - | - | |
Sed07g1329 | 687 | ProSiteProfiles | Protein kinase domain profile. | 292 | 568 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed07g1329 | 687 | ProSitePatterns | Protein kinases ATP-binding region signature. | 298 | 320 | IPR017441 | GO:0005524(InterPro) | |
Sed07g1329 | 687 | Gene3D | Phosphorylase Kinase; domain 1 | 264 | 367 | - | - | |
Sed07g1329 | 687 | SUPERFAMILY | Protein kinase-like (PK-like) | 268 | 565 | IPR011009 | - | |
Sed07g1329 | 687 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 268 | 367 | - | - | |
Sed07g1329 | 687 | PANTHER | OS01G0750732 PROTEIN | 29 | 587 | IPR050885 | - | |
Sed07g1329 | 687 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Sed07g1329 | 687 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 368 | 586 | - | - | |
Sed07g1329 | 687 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 414 | 426 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g1329 | Sed-Chr7:10125157 | Sed07g1331 | Sed-Chr7:10125157 | 0.00E+00 | dispersed | |
Sed07g1328 | Sed-Chr7:10125157 | Sed07g1329 | Sed-Chr7:10125157 | 0.00E+00 | tandem | |
Sed07g1329 | Sed-Chr7:10125157 | Sed07g1330 | Sed-Chr7:10125157 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
79465 | PF07714 | PK_Tyr_Ser-Thr | 1.70E-47 | CL0016 | Sed | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g1329 | - | - | - | 0.0 |