Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1329 ATGGGTTCTTACAAGAAGAGGAAGAAGAGCATGCCACCATCACAAGTTATGATGCTACCACCCCCACCTCCTAATGAGGAATGTGCAATATCATGTACAGAGCCACTTACCTATACGCCTCCTGGTGCACCGTGTGGTTGCGTGTGGCCAATTCAAGCCAAAATCAGCCTTGATGTTGCAATATACACATTTTTCCCTCTGGTTTCTGAGTTTGCAAAGGAAATTGCAGTTAGTCTCAGTCTGAACCATAGCCAAGTTCGAATTATGGGAGCTGATGCTGCTAGCCAGCAGTTGGATAAAACAACGGTCCTCGTCAACTTGGTACCGAGAGGATCGAAATTCAATCAAACCACAGCATATTCGATATATCAGAAATTTTGGCTGAGCAAAATATCCATCAACGCTTCTTTGTTTGGTAGATATCAAGTACTAAATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCGTTATCGACTTCAGGTATCTCATCCATTGATGATGGTTTGAACACTAGGAATACTAATGCTGGAAATGCTATAAAACCGTTCGGAGTTGACGTGCCAAAAAGTAGAAAAGAAGAGCTTAGTGGAAACATGATCGCGGTGATTACGATATCGTCGTTCACTGCCTTTGTAATGTGTGTTGGTCTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTCTGCACATCAACCATCACAAGCTCCACAAAACTTGATAGCCTCATCTACAAAACCATCAGGCACCGCTGAATTGATAATGGTTGAAAGTGAACCTGGCTCTTCATCAACACTTCGTGCTGCCGATCCTATGACGTATATAGGATCGGCAACGAACTTCACATTGAAAGGCATGGAGAAAGCCACAGACAACTTTGATGCTGCAAGAATATTAGGAGAAGGTGGTTTTGGAATTGTTTACAGTGGCAGTTTAGATGATGGAAAGGATGTGGCTGTGAAGGTTCTCAAAAGGCATAATCGACACGGTATTTGCGAATTCTTGGCAGAAGTCGAGATGCTGAGTCGTCTACACCATAGAAATCTTGTTAAGTTGATTGGTATCTGTACTGAAGATCAGATTCGTTGCCTCGTATATGAATTGGTTCCTAATGGAAGCGTTGAATCGCATTTACATGGCATTGACAAGTTAACTGGTCCTCTTGACTGGGATGCCCGCATGAAGATTGCCCTTGGTGCTGCTCGAGGCCTTGCCTATCTGCACGAAGACTCGAATCCTCGAGTCATTCATCGAGATTTCAAAGCTAGCAACATATTGTTGGAATATGACTTTACAGCAAAAGTTTCGGATTTTGGATTAGCTAGAACTGCATTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGATATCTAGCTCCAGAATACGCAATGACTGGCCATCTTCTTGTAAAGAGCGACGTCTACAGCTATGGTGTTGTTCTTCTCGAGTTAATTACAGGAAGAAAGCCAGTTGACTTGTCGCTTCCACCTGGGCAAGAAAATCTCGTTACTTGGGCTCGTCCGCTCCTCACGAGCAAGGAGGGGTTAGATGTCATAACAGACTCAGCTATTAAGTCTGATATCTCCATTGATAGCCTGGCCAGAGTAGCAGCAATTGCTTCAATGTGTGTGCAGCCCGAAGTGTCTCACAGACCGTTTATGGGCGAGGTAGTTCAAGCTCTAAAGCTTGTTTGCAGTGAATTTGAAGAGACTAATGAGCCCGGTTCACAAAGTTACAGCCGAGATGAACTTTTAAGTTACATGGATAGTAAATTTGGAGGGATTTCAGGTGAAATACTAAACACTGTGGAGACCTCACATTGGTTTCATTCGGAAAAGGCGACGAATGTAGGATTATCAGCCTCGGATTTGATCAGCACGTCTGCAAGATTTGAGGGACAGGAACTGGTGTCTTCGAGATGGTATTCATCAAACTCAGAACCGTTGAGAATGGGAAGAAAGAGGGAGATATGGCACAAGCTAAGAAGTTTGTCTCGAGGTAGCATCAGTGAACATGGCTTTTCTTCAAAGTTTTGGCCTGGATTTCGTTAG 2064 43.9 MGSYKKRKKSMPPSQVMMLPPPPPNEECAISCTEPLTYTPPGAPCGCVWPIQAKISLDVAIYTFFPLVSEFAKEIAVSLSLNHSQVRIMGADAASQQLDKTTVLVNLVPRGSKFNQTTAYSIYQKFWLSKISINASLFGRYQVLNVKYPGLPPSPPLSTSGISSIDDGLNTRNTNAGNAIKPFGVDVPKSRKEELSGNMIAVITISSFTAFVMCVGLAWLCLLRCRVSAHQPSQAPQNLIASSTKPSGTAELIMVESEPGSSSTLRAADPMTYIGSATNFTLKGMEKATDNFDAARILGEGGFGIVYSGSLDDGKDVAVKVLKRHNRHGICEFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTAKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELITGRKPVDLSLPPGQENLVTWARPLLTSKEGLDVITDSAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCSEFEETNEPGSQSYSRDELLSYMDSKFGGISGEILNTVETSHWFHSEKATNVGLSASDLISTSARFEGQELVSSRWYSSNSEPLRMGRKREIWHKLRSLSRGSISEHGFSSKFWPGFR 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10125157 10129042 + Sed0023340.6 Sed07g1329 720193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1329 687 Pfam Protein tyrosine and serine/threonine kinase 295 565 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1329 687 CDD STKc_IRAK 298 566 - -
Sed07g1329 687 Gene3D Transferase(Phosphotransferase) domain 1 368 587 - -
Sed07g1329 687 ProSiteProfiles Protein kinase domain profile. 292 568 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1329 687 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524(InterPro)
Sed07g1329 687 Gene3D Phosphorylase Kinase; domain 1 264 367 - -
Sed07g1329 687 SUPERFAMILY Protein kinase-like (PK-like) 268 565 IPR011009 -
Sed07g1329 687 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 268 367 - -
Sed07g1329 687 PANTHER OS01G0750732 PROTEIN 29 587 IPR050885 -
Sed07g1329 687 MobiDBLite consensus disorder prediction 1 20 - -
Sed07g1329 687 FunFam Receptor-like serine/threonine-protein kinase ALE2 368 586 - -
Sed07g1329 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1329 Sed-Chr7:10125157 Sed07g1331 Sed-Chr7:10125157 0.00E+00 dispersed
Sed07g1328 Sed-Chr7:10125157 Sed07g1329 Sed-Chr7:10125157 0.00E+00 tandem
Sed07g1329 Sed-Chr7:10125157 Sed07g1330 Sed-Chr7:10125157 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79465 PF07714 PK_Tyr_Ser-Thr 1.70E-47 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1329 - - - 0.0