Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1373 ATGGATGTTGGCAAACATTTGCTCATTGCTATTTGGGGTCCCTTAGTTCTTGTCCTTCTTGTTCAAGCACAAGATCAATTAGGTTTCATCAGCTTAGATTGTGGATTGCCAACGAATAGAAGCTATATTGAACCAACAACAACACTTGTGTTTACTTCAGATGATGCCTACATAAACAGTGGAGTAGGAATTAGTTTATCTTCTAATTATCAAAGCTTACTTCAACAACAATATCATCATGTTAGAAGCTTTCCCCAAGGACAAAGGAATTGTTACAATATAGACATTAAAAGAGGCACCAAGTATTTGATGCGAGCAAGTTTCTTATACGGAAATTACGATGAACTCGGGGAACTACCAAAATTTGATCTCTACTTTGGAGATAGCTTATGGAAGACAGTGGAATTCATAGATGAAAGCACGAATACCACAATAGAGACCATATATGTGCCTTCAAACAATCAAATCCAAATTTGTCTTGTAAATACAAATAATGGAACTCCATTCATCTCTACATTAGAATTTAGACCTTTGCCTACCGAGAGCTATCAGTTCCCTGAAAAATCGTTGTTGCTTTACAAACGATTAGATTTGGGTTCGACGACACCTAAAATAAATAGGTTTCCTGATGATATCTATGATCGTTTTTGGGCGCCTTTCAACTCCGAGAAGTGGATAAGCATAAGTACCACACTTAAGATAGGCTCTGATCCTACCAACTATTTTCAACCAGGGTCTGCTGTCATGGGAACAGCAACTGTTCAAACAGATATAAACAAGTCCATGGAGATCCAATGGGAGTCAGAAGATGAAAACACCAAGTATCATGTATGCATGCACTTTGCTGAGCTAGAAAATCTCCAACCTAATCAAACAAGAGGATTCAACATTACATATAATAACATTTTTATGTATGGACCTTTTAATCCCCATTACTTGTCCACAACAACTGTTTACACTACACAAACAGTACCACAAGAGCCAACCAAAACGCATATATTCTCGCTTGTTCCATTTGAAAATTCAACGCTTCCTCCGATCCTAAATGCTATGGAAATTTATTCCGTGATAGAATTCTTAGAACTAACATCAGATCAAGAAGATGTGGACGCTATGAAAAACATCAAGTCAACTTATGGAATAGTCAAAGATTGGGAAGGAGATCCATGTGTTCCAAGAGCATGCCCTTGGAAGGGTTTAGACTGTACAAAAAACAATGAAAGCAGTCCTAGAATCGTGTCCTTGAATTTGTCATCAAGTGGATTGACAGGGAAAATTTCTTCATATATATCCAATCTAGAAATGATACAAACTCTGGACTTGTCCAACAATAACCTCACAGGAAATATCCCCACTTTTCTTTCACAATTATCAAAGCTCAAAGTCCTGAAGTTAGAGAATAACCAGCTTACAGGGCCTGTTCCATCTGAACTTATTAGGAAAGCCAATGATGATTCATTAGTGTTAAGTGTTGAAGGGAATCCACATCTAGATGCATGTCTTTCAGAATCGTGTGCAAACAATACGAGTAAGAAAAATAATGTTGTTATCCCAATAGTAGTCACAGTTGTTGGATTGGTAGTCATTGCTGCAATAGCAACTATCACCTTTTGCATTGTTAAATCAAAGAAGAAACAGAAAAATGAAGCTATTGTTTTACAAGTAGATCAAGAGAAAACCAAACACCAATACGGTGACTTCCTCGAAACAAAAAGGCGACAATTTACATATTCAGAAGTATTGGAAATGACAAACAATTTTGAGAGAATTTTGGGTACAGGAGGGTTTGGGGTTGTTTACTATGGTTTTATAGACGGCATTCAAGTAGCTGTAAAGTTACTTTCTCAAGCATCAAGGCATGGTTATCAACAGTTTCAAGCAGAGGTTACCCTTCTCTTGAGAGTTCACCATAAGAACTTGACAAATCTGGTGGGATATTTCTCTGAAGGAAACAACATTGGACTCATTTATGAGTTCATGGCCAATGGAAACTTAGCAGAGCATCTTTCAGGGAAGAGTTCACATGTGTTAAATTGGCAAGATAGACTCCGAATAGCCATAGATGCAGCACAAGGATTGGAGTACCTGCACGATGGATGCAAACCGCCCATAGTCCACAGAGATGTGAAGACAACAAACATCCTATTGGCAGCGGATTTCCAAGCTAAACTTGCAGATTTTGGTTTATCCAAAAGCTTCCCAACAGATGACAATAACAGTAACAATGGCATCTCCACAGTCGTTGCTGGCACCATTGGTTACCTTGATCCAGAATACTACAAATCAAACAAGCTGAGTGAGAAAAGTGATGTGTATAGCTTCGGAGTTACCCTGTTGGAGATAATCAGCTGCAGACCTGTAATACCACGAACTGACAATGATGTTCATATCATCAAATGGGTAAAATCCCAAGCTGCTCAAGGGGACATTAATGGCATAATTGACCGAAAAATGGGTAGAAATTATGATGGGAACTCAGTTTGGAACGCCGTGGAAATAGCTCTGGATTGTGTATCTGATGATCCTGCAAGAAGACCGGCGATGAACCAAGTGGTGGCGGAACTGAAGAAGTGCTTAGCCATAGAATCGGAACGGACGCCGGAAAATGGAGCTTTGGAATCGACGAGTACCATCAACACGATGTCGATTGTTATGAATTACAGTGAATCAGGTCCAATGGCAAGGTGA 2688 38.99 MDVGKHLLIAIWGPLVLVLLVQAQDQLGFISLDCGLPTNRSYIEPTTTLVFTSDDAYINSGVGISLSSNYQSLLQQQYHHVRSFPQGQRNCYNIDIKRGTKYLMRASFLYGNYDELGELPKFDLYFGDSLWKTVEFIDESTNTTIETIYVPSNNQIQICLVNTNNGTPFISTLEFRPLPTESYQFPEKSLLLYKRLDLGSTTPKINRFPDDIYDRFWAPFNSEKWISISTTLKIGSDPTNYFQPGSAVMGTATVQTDINKSMEIQWESEDENTKYHVCMHFAELENLQPNQTRGFNITYNNIFMYGPFNPHYLSTTTVYTTQTVPQEPTKTHIFSLVPFENSTLPPILNAMEIYSVIEFLELTSDQEDVDAMKNIKSTYGIVKDWEGDPCVPRACPWKGLDCTKNNESSPRIVSLNLSSSGLTGKISSYISNLEMIQTLDLSNNNLTGNIPTFLSQLSKLKVLKLENNQLTGPVPSELIRKANDDSLVLSVEGNPHLDACLSESCANNTSKKNNVVIPIVVTVVGLVVIAAIATITFCIVKSKKKQKNEAIVLQVDQEKTKHQYGDFLETKRRQFTYSEVLEMTNNFERILGTGGFGVVYYGFIDGIQVAVKLLSQASRHGYQQFQAEVTLLLRVHHKNLTNLVGYFSEGNNIGLIYEFMANGNLAEHLSGKSSHVLNWQDRLRIAIDAAQGLEYLHDGCKPPIVHRDVKTTNILLAADFQAKLADFGLSKSFPTDDNNSNNGISTVVAGTIGYLDPEYYKSNKLSEKSDVYSFGVTLLEIISCRPVIPRTDNDVHIIKWVKSQAAQGDINGIIDRKMGRNYDGNSVWNAVEIALDCVSDDPARRPAMNQVVAELKKCLAIESERTPENGALESTSTINTMSIVMNYSESGPMAR 895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10417057 10420837 - Sed0007768.1 Sed07g1373 720237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1373 895 SMART serkin_6 585 859 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1373 895 Gene3D Transferase(Phosphotransferase) domain 1 660 878 - -
Sed07g1373 895 ProSitePatterns Protein kinases ATP-binding region signature. 591 612 IPR017441 GO:0005524(InterPro)
Sed07g1373 895 SUPERFAMILY Protein kinase-like (PK-like) 566 855 IPR011009 -
Sed07g1373 895 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 660 868 - -
Sed07g1373 895 Pfam Leucine Rich Repeat 436 457 IPR001611 GO:0005515(InterPro)
Sed07g1373 895 FunFam Leucine-rich repeat receptor-like kinase 367 500 - -
Sed07g1373 895 Gene3D Ribonuclease Inhibitor 369 490 IPR032675 -
Sed07g1373 895 FunFam Leucine-rich repeat receptor-like protein kinase 558 659 - -
Sed07g1373 895 PANTHER OS07G0107800 PROTEIN-RELATED 20 864 - -
Sed07g1373 895 Gene3D Phosphorylase Kinase; domain 1 567 659 - -
Sed07g1373 895 ProSiteProfiles Protein kinase domain profile. 585 859 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1373 895 Pfam Protein tyrosine and serine/threonine kinase 587 855 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1373 895 SUPERFAMILY L domain-like 368 479 - -
Sed07g1373 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 704 716 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1373 895 Pfam Malectin-like domain 32 356 IPR024788 -
Sed07g1373 895 CDD STKc_IRAK 591 857 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0118 Sed-Chr6:766880 Sed07g1373 Sed-Chr7:10417057 1.90E-71 dispersed
Sed07g1373 Sed-Chr7:10417057 Sed09g1630 Sed-Chr9:39760669 7.50E-301 dispersed
Sed07g1376 Sed-Chr7:10440769 Sed07g1373 Sed-Chr7:10417057 3.80E-17 dispersed
Sed07g1372 Sed-Chr7:10410603 Sed07g1373 Sed-Chr7:10417057 0.00E+00 tandem
Sed07g1373 Sed-Chr7:10417057 Sed07g1374 Sed-Chr7:10428097 7.70E-197 tandem
Sed09g1558 Sed-Chr9:39126845 Sed07g1373 Sed-Chr7:10417057 3.00E-201 transposed
Sed06g2179 Sed-Chr6:45543130 Sed07g1373 Sed-Chr7:10417057 1.70E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79474 PF12819 Malectin_like 9.00E-107 CL0202 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1373 - - - 0.0