Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1494 ATGGGAATGAACTCCAATCGAGTTGAGAGCTTGGAATGTCGCGAAACGGCGTTGACGATTCCGCCGGAGACAATGCCGGCGGCGGCGGCGGCGGCGGAGGAGATTCACAAAGTCTGCCTGCCGCCGAACCAGACCACGGTTGAGAAACTCAAGCACAAGTTATCGGAAGTGTTCTTCCCCGATGATCCATTCCACAGATTCAAGAACCAAACGTGGTTTACAAAACTGCTTTTAGGCTTTCAATTTCTGTTCCCTGTGTTTCAGTGGGGGCCCGATTATACCCTAGCTCTCTTCAAATCCGACGTCGTTTCAGGTCTCACAATCGCTAGCCTCGCTATTCCCCAGGGGATAAGCTATGCGAAACTTGCGAATTTGCCTCCAATCATTGGATTATATTCAAGTTTTGTGCCTCCATTGATATATTCTATACTTGGAAGCTCTAGACATCTTGCTGTTGGTCCTGTTTCAATTGCCTCTTTGGTTATGGGGTCGATGATTAATGAAGCAGTCTCTTATAATGAGCACCCAAATTTGTATCTTAAGTTGGCTTTTACTGCTACCTTCTTTGCTGGTGTGTTCCAAGCATCTTTAGGTTTGTTAAGGCTAGGATTTGTGATTGATTTTCTGTCTAAGGCTACTTTAGTTGGCTTTATGGCTGGAGCAGCAGTCATTGTGTCGTTGCAACAACTCAAAGGGTTGCTTGGAATTTCCCATTTCACTTCCAAAATGCAATTTATTCCTGTCATGTCTTCTGTCTTTCACCGCAAAGATGAGTGGTCCTGGCAAACTATTGTTTTAGGCTCCATTTTCTTACTCTTTCTTCTAGGAACAAGGCATATAAGCATCAAGAAACCAAAGCTTTTCTGGATTTCAGCAGCTGCTCCATTGACATCAGTTATTTTGTCCACTCTTTTAGTCTTCCTTCTTAGAGCAAAAGTTCCTGGAATCTCAGTGATTGGTTATTTGCCAAAGGGCGTCAACCCTCCATCTTTGAACATGTTGTACTTTACTGGACCTCAATTGGCACTTGCCATTAAAACTGGCATTATAACTGGAATTCTCTCTCTCACTGAAGGAATTGCCGTAGGAAGGACGTTTGCTGGTTTGAAAAACTATCAAGTGGATGGGAATAAAGAAATGATGGCTATTGGTTTTATGAACATGGCTGGATCTTGTTCTTCATGCTACGTCACTACAGGATCGTTTTCTCGGTCGGCTGTGAATTATAATGCTGGAGCACAAACAGCAGTCTCAAATGTAGTGATGTCTGCAGCTGTGCTCGTAACGTTGTTGTTTCTGATGCCACTGTTCCATTATACTCCAAATTTCATCCTGGCAGCCATCATCATAACAGCAGTAATTGGACTAATTGATTACCAAGCTGCCTGTAGGTTGTGGAAAGTTGACAAGCTTGATTTCGTAGCTTGTATCTGTTCTTTCTTCGGCGTTCTTTTCATCTCGGTTCCGTTGGGTCTTGCCATTGCAGTTGGAGTCTCTGTTTTCAAGATTCTTCTGCATGTCACTAGACCAAACACCATGGTTTTGGGGAATATTTCTGGGACTCAAATATTCCAAAACCTTGATCGATACCGAGAGGCCTCGAGGGTGCCTTCATTCCTCATTCTTTCCATTGAATCTCCAATTTACTTCGCGAATTCAACATACCTACAAGAAAGGATTCTTAGGTGGATTAGGGAAGAAGAAGAGCGAATAAAAGCGACTAACGACAGTCCACTAAAATGTGTAGTCCTAGACATGACAGCTGTGACATCCATAGACACAAGTGGTATAGAAACAATATGTGAACTTAGGAAGATACTAATGCAAAAATCACTGCAGTTCGTGCTCGCAAATCCGGGTGGAAACGTGATGGAAAAACTGTATAAATCGAAGTCGTTGGAGCAGTTTGAGTTCAACGGACTCTACCTCTCAGTCGGAGAAGCTGTGATGGACATTTCTTCTCTATGGAAGAGGACACCATAA 1983 43.32 MGMNSNRVESLECRETALTIPPETMPAAAAAAEEIHKVCLPPNQTTVEKLKHKLSEVFFPDDPFHRFKNQTWFTKLLLGFQFLFPVFQWGPDYTLALFKSDVVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGSMINEAVSYNEHPNLYLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGISHFTSKMQFIPVMSSVFHRKDEWSWQTIVLGSIFLLFLLGTRHISIKKPKLFWISAAAPLTSVILSTLLVFLLRAKVPGISVIGYLPKGVNPPSLNMLYFTGPQLALAIKTGIITGILSLTEGIAVGRTFAGLKNYQVDGNKEMMAIGFMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNVVMSAAVLVTLLFLMPLFHYTPNFILAAIIITAVIGLIDYQAACRLWKVDKLDFVACICSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTMVLGNISGTQIFQNLDRYREASRVPSFLILSIESPIYFANSTYLQERILRWIREEEERIKATNDSPLKCVVLDMTAVTSIDTSGIETICELRKILMQKSLQFVLANPGGNVMEKLYKSKSLEQFEFNGLYLSVGEAVMDISSLWKRTP 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11746168 11750265 + Sed0016459.1 Sed07g1494 720358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1494 660 Pfam Sulfate permease family 98 477 IPR011547 GO:0016020(InterPro)
Sed07g1494 660 FunFam Sulfate transporter 31 509 654 - -
Sed07g1494 660 CDD STAS_SulP_like_sulfate_transporter 530 645 - -
Sed07g1494 660 Gene3D STAS domain 509 654 IPR036513 -
Sed07g1494 660 NCBIfam sulfate permease 85 648 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Sed07g1494 660 PANTHER SULFATE TRANSPORTER 74 650 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed07g1494 660 ProSiteProfiles STAS domain profile. 529 652 IPR002645 -
Sed07g1494 660 Pfam STAS domain 531 648 IPR002645 -
Sed07g1494 660 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Sed07g1494 660 SUPERFAMILY SpoIIaa-like 534 649 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0246 Sed-Chr6:2020216 Sed07g1494 Sed-Chr7:11746168 6.20E-228 dispersed
Sed07g1494 Sed-Chr7:11746168 Sed07g1496 Sed-Chr7:11746168 0.00E+00 dispersed
Sed07g1494 Sed-Chr7:11746168 Sed07g1495 Sed-Chr7:11746168 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1494 K17471 - csv:101203079 1171.76