Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1495 ATGGGAATGAACTCCAATCGAGTTGAGAGCTTGGAATGTCGCGAAACGGCGTTGACGATTCCGCCGGAGACAATGCCGGCGGCGGCGGCGGCGGCGGAGGAGATTCACAAAGTCTGCCTGCCGCCGAACCAGACCACGGTTGAGAAACTCAAGCACAAGTTATCGGAAGTGTTCTTCCCCGATGATCCATTCCACAGATTCAAGAACCAAACGTGGTTTACAAAACTGCTTTTAGGCTTTCAATTTCTGTTCCCTGTGTTTCAGTGGGGGCCCGATTATACCCTAGCTCTCTTCAAATCCGACGTCGTTTCAGGTCTCACAATCGCTAGCCTCGCTATTCCCCAGGGGATAAGCTATGCGAAACTTGCGAATTTGCCTCCAATCATTGGATTATATTCAAGTTTTGTGCCTCCATTGATATATTCTATACTTGGAAGCTCTAGACATCTTGCTGTTGGTCCTGTTTCAATTGCCTCTTTGGTTATGGGGTCGATGATTAATGAAGCAGTCTCTTATAATGAGCACCCAAATTTGTATCTTAAGTTGGCTTTTACTGCTACCTTCTTTGCTGGTGTGTTCCAAGCATCTTTAGGTTTGTTAAGGCTAGGATTTGTGATTGATTTTCTGTCTAAGGCTACTTTAGTTGGCTTTATGGCTGGAGCAGCAGTCATTGTGTCGTTGCAACAACTCAAAGGGTTGCTTGGAATTTCCCATTTCACTTCCAAAATGCAATTTATTCCTGTCATGTCTTCTGTCTTTCACCGCAAAGATGAGAGCATCAAGAAACCAAAGCTTTTCTGGATTTCAGCAGCTGCTCCATTGACATCAGTTATTTTGTCCACTCTTTTAGTCTTCCTTCTTAGAGCAAAAGTTCCTGGAATCTCAGTGATTGGTTATTTGCCAAAGGGCGTCAACCCTCCATCTTTGAACATGTTGTACTTTACTGGACCTCAATTGGCACTTGCCATTAAAACTGGCATTATAACTGGAATTCTCTCTCTCACTGAAGGAATTGCCGTAGGAAGGACGTTTGCTGGTTTGAAAAACTATCAAGTGGATGGGAATAAAGAAATGATGGCTATTGGTTTTATGAACATGGCTGGATCTTGTTCTTCATGCTACGTCACTACAGGATCGTTTTCTCGGTCGGCTGTGAATTATAATGCTGGAGCACAAACAGCAGTCTCAAATGTAGTGATGTCTGCAGCTGTGCTCGTAACGTTGTTGTTTCTGATGCCACTGTTCCATTATACTCCAAATTTCATCCTGGCAGCCATCATCATAACAGCAGTAATTGGACTAATTGATTACCAAGCTGCCTGTAGGTTGTGGAAAGTTGACAAGCTTGATTTCGTAGCTTGTATCTGTTCTTTCTTCGGCGTTCTTTTCATCTCGGTTCCGTTGGGTCTTGCCATTGCAGTTGGAGTCTCTGTTTTCAAGATTCTTCTGCATGTCACTAGACCAAACACCATGGTTTTGGGGAATATTTCTGGGACTCAAATATTCCAAAACCTTGATCGATACCGAGAGGCCTCGAGGGTGCCTTCATTCCTCATTCTTTCCATTGAATCTCCAATTTACTTCGCGAATTCAACATACCTACAAGAAAGGATTCTTAGGTGGATTAGGGAAGAAGAAGAGCGAATAAAAGCGACTAACGACAGTCCACTAAAATGTGTAGTCCTAGACATGACAGCTGTGACATCCATAGACACAAGTGGTATAGAAACAATATGTGAACTTAGGAAGATACTAATGCAAAAATCACTGCAGTTCGTGCTCGCAAATCCGGGTGGAAACGTGATGGAAAAACTGTATAAATCGAAGTCGTTGGAGCAGTTTGAGTTCAACGGACTCTACCTCTCAGTCGGAGAAGCTGTGATGGACATTTCTTCTCTATGGAAGAGGACACCATAA 1917 43.51 MGMNSNRVESLECRETALTIPPETMPAAAAAAEEIHKVCLPPNQTTVEKLKHKLSEVFFPDDPFHRFKNQTWFTKLLLGFQFLFPVFQWGPDYTLALFKSDVVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGSMINEAVSYNEHPNLYLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGISHFTSKMQFIPVMSSVFHRKDESIKKPKLFWISAAAPLTSVILSTLLVFLLRAKVPGISVIGYLPKGVNPPSLNMLYFTGPQLALAIKTGIITGILSLTEGIAVGRTFAGLKNYQVDGNKEMMAIGFMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNVVMSAAVLVTLLFLMPLFHYTPNFILAAIIITAVIGLIDYQAACRLWKVDKLDFVACICSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTMVLGNISGTQIFQNLDRYREASRVPSFLILSIESPIYFANSTYLQERILRWIREEEERIKATNDSPLKCVVLDMTAVTSIDTSGIETICELRKILMQKSLQFVLANPGGNVMEKLYKSKSLEQFEFNGLYLSVGEAVMDISSLWKRTP 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11746168 11750265 + Sed0016459.2 Sed07g1495 720359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1495 638 Pfam STAS domain 509 626 IPR002645 -
Sed07g1495 638 CDD STAS_SulP_like_sulfate_transporter 508 623 - -
Sed07g1495 638 FunFam Sulfate transporter 31 487 632 - -
Sed07g1495 638 ProSiteProfiles STAS domain profile. 507 630 IPR002645 -
Sed07g1495 638 Gene3D STAS domain 487 632 IPR036513 -
Sed07g1495 638 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Sed07g1495 638 Pfam Sulfate permease family 261 455 IPR011547 GO:0016020(InterPro)
Sed07g1495 638 Pfam Sulfate permease family 98 255 IPR011547 GO:0016020(InterPro)
Sed07g1495 638 PANTHER SULFATE TRANSPORTER 74 628 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed07g1495 638 SUPERFAMILY SpoIIaa-like 512 627 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1495 Sed-Chr7:11746168 Sed07g1497 Sed-Chr7:11746168 0.00E+00 dispersed
Sed07g1494 Sed-Chr7:11746168 Sed07g1495 Sed-Chr7:11746168 0.00E+00 tandem
Sed07g1495 Sed-Chr7:11746168 Sed07g1496 Sed-Chr7:11746168 3.0e-312 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1495 K17471 - csv:101203079 1115.91