Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1496 ATGGGAATGAACTCCAATCGAGTTGAGAGCTTGGAATGTCGCGAAACGGCGTTGACGATTCCGCCGGAGACAATGCCGGCGGCGGCGGCGGCGGCGGAGGAGATTCACAAAGTCTGCCTGCCGCCGAACCAGACCACGGTTGAGAAACTCAAGCACAAGTTATCGGAAGTGTTCTTCCCCGATGATCCATTCCACAGATTCAAGAACCAAACGTGGTTTACAAAACTGCTTTTAGGCTTTCAATTTCTGTTCCCTGTGTTTCAGTGGGGGCCCGATTATACCCTAGCTCTCTTCAAATCCGACGTCGTTTCAGGTCTCACAATCGCTAGCCTCGCTATTCCCCAGGGGATAAGCTATGCGAAACTTGCGAATTTGCCTCCAATCATTGGATTATATTCAAGTTTTGTGCCTCCATTGATATATTCTATACTTGGAAGCTCTAGACATCTTGCTGTTGGTCCTGTTTCAATTGCCTCTTTGGTTATGGGGTCGATGATTAATGAAGCAGTCTCTTATAATGAGCACCCAAATTTGTATCTTAAGTTGGCTTTTACTGCTACCTTCTTTGCTGGTGTGTTCCAAGCATCTTTAGGTTTGTTAAGGCTAGGATTTGTGATTGATTTTCTGTCTAAGGCTACTTTAGTTGGCTTTATGGCTGGAGCAGCAGTCATTGTGTCGTTGCAACAACTCAAAGGGTTGCTTGGAATTTCCCATTTCACTTCCAAAATGCAATTTATTCCTGTCATGTCTTCTGTCTTTCACCGCAAAGATGAGTGGTCCTGGCAAACTATTGTTTTAGGCTCCATTTTCTTACTCTTTCTTCTAGGAACAAGGCATATAAGCATCAAGAAACCAAAGCTTTTCTGGATTTCAGCAGCTGCTCCATTGACATCAGTTATTTTGTCCACTCTTTTAGTCTTCCTTCTTAGAGCAAAAGTTCCTGGAATCTCAGTGATTGGTTATTTGCCAAAGGGCGTCAACCCTCCATCTTTGAACATGTTGTACTTTACTGGACCTCAATTGGCACTTGCCATTAAAACTGGCATTATAACTGGAATTCTCTCTCTCACTGAAGGAATTGCCGTAGGAAGGACGTTTGCTGGTTTGAAAAACTATCAAGTGGATGGGAATAAAGAAATGATGGCTATTGGTTTTATGAACATGGCTGGATCTTGTTCTTCATGCTACGTCACTACAGGATCGTTTTCTCGGTCGGCTGTGAATTATAATGCTGGAGCACAAACAGCAGTCTCAAATGTAGTGATGTCTGCAGCTGTGCTCGTAACGTTGTTGTTTCTGATGCCACTGTTCCATTATACTCCAAATTTCATCCTGGCAGCCATCATCATAACAGCAGTAATTGGACTAATTGATTACCAAGCTGCCTGTAGGTTGTGGAAAGTTGACAAGCTTGATTTCGTAGCTTGTATCTGTTCTTTCTTCGGCGTTCTTTTCATCTCGGTTCCGTTGGGTCTTGCCATTGCAGTTGGAGTCTCTGTTTTCAAGATTCTTCTGCATGTCACTAGACCAAACACCATGGTTTTGGGGAATATTTCTGGGACTCAAATATTCCAAAACCTTGATCGATACCGAGAGGCCTCGAGGGTGCCTTCATTCCTCATTCTTTCCATTGAATCTCCAATTTACTTCGCGAATTCAACATACCTACAAGAAAGGATTCTTAGGTGGATTAGGGAAGAAGAAGAGCGAATAAAAGCGACTAACGACAGTCCACTAAAATGTGTAGTCCTAGACATGACAGGTATGTTGAGCAAACAATTTTGCTTGTAA 1791 43.22 MGMNSNRVESLECRETALTIPPETMPAAAAAAEEIHKVCLPPNQTTVEKLKHKLSEVFFPDDPFHRFKNQTWFTKLLLGFQFLFPVFQWGPDYTLALFKSDVVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGSMINEAVSYNEHPNLYLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGISHFTSKMQFIPVMSSVFHRKDEWSWQTIVLGSIFLLFLLGTRHISIKKPKLFWISAAAPLTSVILSTLLVFLLRAKVPGISVIGYLPKGVNPPSLNMLYFTGPQLALAIKTGIITGILSLTEGIAVGRTFAGLKNYQVDGNKEMMAIGFMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNVVMSAAVLVTLLFLMPLFHYTPNFILAAIIITAVIGLIDYQAACRLWKVDKLDFVACICSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTMVLGNISGTQIFQNLDRYREASRVPSFLILSIESPIYFANSTYLQERILRWIREEEERIKATNDSPLKCVVLDMTGMLSKQFCL 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11746168 11750265 + Sed0016459.3 Sed07g1496 720360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1496 596 Gene3D STAS domain 509 591 IPR036513 -
Sed07g1496 596 PANTHER SULFATE TRANSPORTER 74 590 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed07g1496 596 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Sed07g1496 596 CDD STAS_SulP_like_sulfate_transporter 530 589 - -
Sed07g1496 596 ProSiteProfiles STAS domain profile. 529 589 IPR002645 -
Sed07g1496 596 Pfam STAS domain 531 588 IPR002645 -
Sed07g1496 596 Pfam Sulfate permease family 98 477 IPR011547 GO:0016020(InterPro)
Sed07g1496 596 NCBIfam sulfate permease 85 587 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1494 Sed-Chr7:11746168 Sed07g1496 Sed-Chr7:11746168 0.00E+00 dispersed
Sed07g1496 Sed-Chr7:11746168 Sed09g1100 Sed-Chr9:34958780 6.30E-195 dispersed
Sed07g1495 Sed-Chr7:11746168 Sed07g1496 Sed-Chr7:11746168 3.0e-312 tandem
Sed07g1496 Sed-Chr7:11746168 Sed07g1497 Sed-Chr7:11746168 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1496 K17471 - csv:101203079 1045.42