Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1512 ATGGAGAACAAATTAGAAAAGAAGAGAATTCCAAGCATCTCCTCTCCATTTATGTCATCTTCTTTGATGGCTTTCCTCCTGGTTTTCCTCTGTTTAATCTTTTACGGCCCGAACGTAGCATTCGCGGTCGGGCCGGGCGCTTCCTTCACTCCCAAAGATAGTTTTCTCATTGATTGTGGTTCCACAAAAGACCTTGGTTCACTCCCTGATGGAAGAGTGTTCAAAACTGATGAGCAATCCAAGCAGTACCTAGATGCCAAGGAAGATATCTTAGCGGCTGCCTCACCAGAGGCGAAACCACCATCCCCGGTTGATTTGACGGCGAGAGTCTTCCTCCAAGAAGCTACTTACATGTTTCAGTTGACCGAGCCGGGATGGCATTGGCTGCGCCTCCATTTCCTTCCGGCTAAAACCGATGCCTTCGATCTCTTGCAGGCTAAATTCTCAGTAGCTACTGATCATTATGTGTTGCTTCACAGCTTCAACATCAACAAAGAATCCACATTTGTTCTTAAAGAGTTTTTGCTAAATATCAATGAACCAAAACTCACAATCAAGTTCCTCCCCTCGAGGAATTCAGCTGCTTTCATCAATGCCATCGAGCTCGTCTCTGCTCCGGAAGACTTGATCGCGGACTCGAACTTTGAGCTGTCTCCGGTCGGGACCATTGAGGGCCTCACGAAATACGCGTTTCAGACATTGTATAGGCTGAACATGGGGGGACCTATAATCACTCCAAGAAATGACACTCTTGGGAGGACATGGGGGACAGATGAAGTTTACAGGATACCTTTAGCTGCTGGTAGGAGTGTGATTGCTGAGACAAACAGCATCAAATATCAAGATGGAAAGAAAGAAAAAGGCATGTTAATTGCTCCTCCAAGTGTTTATGCAAGTGCTGTTCAAATGGGAGAAGCTCAAGTTAATGTACCAAATTTCAACATCACATGGAAATTTGAGGCAGATCCTTCATTTTGCTACCTAATTCGCTTTCATTTCTGTGATATTATCAGCAAAAATCTCAATACTTTGTATTTCAATGTTTATGTAAATGGGATGCCTGCAATAACCAACTTGGATTTGTCACACAAGCTAGGAGCTTTAGCAACTGCATACTACAAGGATGTTGTGCTTAATTCTTCCTTAATTGTAGATGGATTGAAGATTCAAGTTAGTCCGGCCAACGTCGAAACGGGCGATACAAATGCCATTCTAAACGGGTTAGAGGTATTGAAAATAAGCAACTCAGTTAATAGTCTGGATGGAGAGTTTGGAGTGGATGGTAAGTCCGCGAATGGGTCGAACCGTGGCACGGTGGCTGCAGTTGGGTTTGCAATGATGTTCGGGGCATTTGTCGGACTTGGTGCAATGGTGATGAAATGGCACAAGAGGCCTCAAGATTGGCAAAAGAGGAATAGTTTCTCTTCCTGGTTGCTGCCTGTGCATGCTAGTGATTCAAGTTTTATGTCAAGCAAAAACTCATATGGTTCACATAAGACAAACATTTACTCATCTGGTTTAGGCCTTGGGAGGTACTTCACATTTGCAGAGCTGCAAGATGCAACAAAAAACTTTGATTCAGATTCAATAATTGGTGTTGGTGGGTTTGGAAATGTGTACCTTGGAGTGATTGATGAAGGGACAAAAGTTGCAGTTAAGAGAGGAAATCCACAATCAGAACAAGGCATTACAGAATTCCAAACAGAAATCCAAATGCTTTCAAAACTAAGGCACAGGCATTTGGTTTCATTGATTGGATACTGTGATGAAAACTCTGAAATGATTTTGGTATATGAGTACATGTCAAATGGGCCATTCAGAGATCACTTGTATGGAAAGGACCTTCCTCCATTGTCATGGAAGCAAAGGCTAGAGATCTGCATCGGATCCGCTCGAGGTCTTCATTACCTTCACACAGGAACGGCACAGGGAATCATCCACCGCGATGTGAAAACAACCAACATTTTGCTCGACGATAGCTTCACGGCTAAAGTCGCCGATTTCGGGCTGTCGAAGGATGCACCAATGGGGCAGGGACATGTTAGTACAGCAGTGAAGGGAAGTTTTGGATATTTGGATCCAGAGTACTTTAGAAGGCAACAACTGACAGAAAAATCAGATGTTTATTCCTTTGGAGTTGTTTTACTTGAAGCTTTATGTGTAAGGCCAGCAATAAACCCAACTTTGTCAAGGGAACAAGTGAATTTAGCTGATTGGGCAATGCAAAATAAAAGAAAAGGAACTTTGGAAAAGATTATGGATCCACTTTTAGTTGGAACCATAAATCCTGAGTCAATGAAAAAGCTTGCTGAAGCAGCAGAGAAATGTCTTGCTGAGCATGGAGTTGATAGGCCAAGCATGGGGGATGTGCTATGGAATTTGGAATATGCATTACAACTTCAAGAAGCATTCACACAAGGCAAGGCTGAAGAAGAAACCAAACCCGCCGCCGCCGTAGTTGTTGTCCCCGCTACTCCTACCAATGTCGATACACAGAACTCCGACAACCGGCCTGTGCTGCAGCCAGAGCAACAGAATCGGCAACCGGCCGAGGTCCAAACCAATGATCATTCAGGAACTGCAATGTTTGCACATTTTTCTGATCTCAATGGTAGATGA 2619 43.76 MENKLEKKRIPSISSPFMSSSLMAFLLVFLCLIFYGPNVAFAVGPGASFTPKDSFLIDCGSTKDLGSLPDGRVFKTDEQSKQYLDAKEDILAAASPEAKPPSPVDLTARVFLQEATYMFQLTEPGWHWLRLHFLPAKTDAFDLLQAKFSVATDHYVLLHSFNINKESTFVLKEFLLNINEPKLTIKFLPSRNSAAFINAIELVSAPEDLIADSNFELSPVGTIEGLTKYAFQTLYRLNMGGPIITPRNDTLGRTWGTDEVYRIPLAAGRSVIAETNSIKYQDGKKEKGMLIAPPSVYASAVQMGEAQVNVPNFNITWKFEADPSFCYLIRFHFCDIISKNLNTLYFNVYVNGMPAITNLDLSHKLGALATAYYKDVVLNSSLIVDGLKIQVSPANVETGDTNAILNGLEVLKISNSVNSLDGEFGVDGKSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHASDSSFMSSKNSYGSHKTNIYSSGLGLGRYFTFAELQDATKNFDSDSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMSNGPFRDHLYGKDLPPLSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDDSFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCVRPAINPTLSREQVNLADWAMQNKRKGTLEKIMDPLLVGTINPESMKKLAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFTQGKAEEETKPAAAVVVVPATPTNVDTQNSDNRPVLQPEQQNRQPAEVQTNDHSGTAMFAHFSDLNGR 872
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11812075 11814693 + Sed0025465.1 Sed07g1512 720376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1512 872 SUPERFAMILY Protein kinase-like (PK-like) 509 792 IPR011009 -
Sed07g1512 872 FunFam Putative receptor-like protein kinase 54 206 - -
Sed07g1512 872 SMART serkin_6 525 797 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1512 872 CDD STKc_IRAK 531 795 - -
Sed07g1512 872 Pfam Malectin-like domain 57 412 IPR024788 -
Sed07g1512 872 Pfam Protein tyrosine and serine/threonine kinase 529 790 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1512 872 FunFam Receptor-like protein kinase FERONIA 601 814 - -
Sed07g1512 872 MobiDBLite consensus disorder prediction 825 858 - -
Sed07g1512 872 ProSiteProfiles Protein kinase domain profile. 525 797 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1512 872 Gene3D Transferase(Phosphotransferase) domain 1 601 820 - -
Sed07g1512 872 Gene3D Phosphorylase Kinase; domain 1 486 600 - -
Sed07g1512 872 Gene3D - 229 415 - -
Sed07g1512 872 Gene3D - 54 207 - -
Sed07g1512 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1512 872 FunFam Receptor-like protein kinase FERONIA 230 415 - -
Sed07g1512 872 PANTHER OS07G0166700 PROTEIN 514 802 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Sed07g1512 872 FunFam receptor-like protein kinase FERONIA 488 600 - -
Sed07g1512 872 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1512 Sed-Chr7:11812075 Sed08g0239 Sed-Chr8:1358785 1.60E-252 dispersed
Sed10g1035 Sed-Chr10:9121258 Sed07g1512 Sed-Chr7:11812075 6.90E-63 transposed
Sed07g1512 Sed-Chr7:11812075 Sed09g1544 Sed-Chr9:38981033 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79504 PF12819 Malectin_like 1.90E-36 CL0202 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1512 - - - 0.0