Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1579 ATGGCGGGGAATGCGACGGTGGCGGGAAGCTGTTTGGGGGCGATGAAAGCGACGTCGAACGGAGTGTTTCAGGGCGACAATCCGCTTGATTTCGCTCTTCCTTTGGCCATCCTTCAGATATGTTTGGTGGTTGTTCTCACCCGTGTTCTTGCTTTGCTTCTCCGGCCACTCAGACAGCCTCGAGTCGTCGCTGAGATTGTCGGGGGAATATTGCTAGGACCATCAGCGTTGGGTCGGAGCCAAGAATTTCTACACAAAGTATTCCCATCAAGGAGCTTAACCGTGTTAGACACATTAGCCAATCTTGGCCTTCTCTTCTTCTTATTTCTCGTTGGCCTAGAGCTCGATCTCAAATCCCTCCGCCACACCGGAAAGGGCGCGTTGGGGATCGCCGCTGCCGGAATCACCCTCCCCTTCGTCCTCGGCATTGGCACCTCCTACATCCTCCGCTCCACTATCTCTCAAGGCGTCCACGGCCCTCCTTTCCTCGTCTTCATGGGCGTCGCTCTCTCCATCACCGCCTTCCCCGTTCTCGCTCGCATTCTCGCCGAGCTCAAGCTCTTAACCACCAATGTCGGTCGCACCGCGATGTCTGCTGCTGCTGTCAACGACGTTGTTGCATGGATCCTCCTTGCCCTCGCCATCGCCCTCTCGGGCACTGGCCGCTCCCCTCTTGTCTCCCTTTGGGTCTTCCTCACCGGCTTTGCTTTCGTCCTGTTTTGCTTCTTCGCTCTCCCTCCAATCTTCAACTGGATGTCCCGCCGCTGCTCTGAAGGCGAGCCGGTCAGCGAGCTCTACATTTGTGCCACATTGTCCATCGTCCTCGCCGCCGGATTCTTCACTGACTTAATTGGAATCCACGCCCTCTTCGGCGCGTTCATCGTTGGCGTCCTTGTCCCCAAAGAGGGCCCACTCTCCAGCGCCCTTGTCGAGAAAGTCGAAGATCTCGTCTCCGGCCTCTTCCTCCCTCTCTACTTCGTATCCAGCGGATTAAAAACCAACATCGCAACAATCAAAGGCGCGCAATCGTGGGGTCTCCTCGTCCTCGTCGTCCTCACCGCCTGTATCGGTAAAATCCTCGGCACGGTTGGGGTAGCCCTGTACTGCAAAATGCCATTCCAAGAATCCCTCGCATTGGGATTCCTAATGAACACAAAAGGACTAGTGGAACTAATCGTCCTCAACATAGGAAAAGACAGAAAAGTACTAAACGACCAAACATTCGCCATCCTCGTCCTAATGGCGATCATCACAACATTCATCACAACCCCGCTAGTAATGGCGGTGTACAAGCCGGCGAAGCGGAAGAGCAAATCCGAATACATGTACCGGACGATGGAGCGGGAGGATCCGAACTCGGAGCTGCGGATTCTGGGATGTTTCCATTCGGTAGGCAACATTCCATCGGTCTTGAATTTGATCGAGGCGTCGCGGGGGACGGAAGGGCGGGGGAAGCGGCTGTGCGTTTACGCGATGCATTTGATGGAGCTGACGGAGAGGTCGTCGGCGATTGTGATGGTGAATAGAGCGAGGAAGAATGGGGTTCCGTTTTGGAATAAAGCAGGAAAGTCGGATTCCGATCAGATCGTGGTTGCTTTCGAGGCCTTCCGGCAGCTTAGTCGAGTGTCTGTACGGCCAATGACGGCCATATCTCCGCTCTCTAATATGCATGAAGATATCTGCAACAGCGCTGAGCAGAAACGAGCCGCCATTATCATCCTTCCCTTTCACAAACACCAAAGGTTTGATGGATCTTTAGAGACAACACGAGGCGATTTCCAATGGGTCAATCAAAAAGTTCTCGAGCAGCCACCTTGCTCCGTCGGGATCTTGGTCGACCGCGGATTCGGAGGTGGTTCTCACATTTGCGCTAGCAATGTCTCTTCCACCATAACCGTCTTCTTCTTCGGCGGCCGTGATGACCGTGAAGCTCTAGCCTACGGTCGAAGAATGGCCGAGCACCCCGGCATAACCCTAAACGTTATCCGCTTCATTCCGAGCCCTGACATGGCTGTCGAATCCACTACGATTGACATGAACAAAGACGACACTAATGTTTCAACAACCATGGATGCAAGGGTGTTGACGGAGTTCAACATGAAGAAAATCGATGACGAATCGGTCAAGTACGAAGAGAGGGTTGTGAGGAAAATCAATGACACTATTGATGTAATGAGGGAGTTTAGTAGATGTAATTTGATATTGGTGGGTCAAATGCCAGAAGGGCAAGTAGTGGAGGGTTTTCATTTGAAAAGTGTGGAATTTCCAGAGTTGGGTCCAATTGGCAGCTTGTTGACTTCACCCGAGCTCTCCACGTCAGCTTCCGTGTTGGTGATTCAGCAGTTTCGGGGTCCGTTGTCGTCGTCATCTTCCACATCAGCAATGGTATTACCCGAAGAAGTTAAGTAG 2409 52.89 MAGNATVAGSCLGAMKATSNGVFQGDNPLDFALPLAILQICLVVVLTRVLALLLRPLRQPRVVAEIVGGILLGPSALGRSQEFLHKVFPSRSLTVLDTLANLGLLFFLFLVGLELDLKSLRHTGKGALGIAAAGITLPFVLGIGTSYILRSTISQGVHGPPFLVFMGVALSITAFPVLARILAELKLLTTNVGRTAMSAAAVNDVVAWILLALAIALSGTGRSPLVSLWVFLTGFAFVLFCFFALPPIFNWMSRRCSEGEPVSELYICATLSIVLAAGFFTDLIGIHALFGAFIVGVLVPKEGPLSSALVEKVEDLVSGLFLPLYFVSSGLKTNIATIKGAQSWGLLVLVVLTACIGKILGTVGVALYCKMPFQESLALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAILVLMAIITTFITTPLVMAVYKPAKRKSKSEYMYRTMEREDPNSELRILGCFHSVGNIPSVLNLIEASRGTEGRGKRLCVYAMHLMELTERSSAIVMVNRARKNGVPFWNKAGKSDSDQIVVAFEAFRQLSRVSVRPMTAISPLSNMHEDICNSAEQKRAAIIILPFHKHQRFDGSLETTRGDFQWVNQKVLEQPPCSVGILVDRGFGGGSHICASNVSSTITVFFFGGRDDREALAYGRRMAEHPGITLNVIRFIPSPDMAVESTTIDMNKDDTNVSTTMDARVLTEFNMKKIDDESVKYEERVVRKINDTIDVMREFSRCNLILVGQMPEGQVVEGFHLKSVEFPELGPIGSLLTSPELSTSASVLVIQQFRGPLSSSSSTSAMVLPEEVK 802
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 12630883 12635867 + Sed0014544.1 Sed07g1579 720443
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1579 802 PANTHER CATION/H + ANTIPORTER 11 789 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Sed07g1579 802 FunFam Cation/H(+) antiporter 15 35 437 - -
Sed07g1579 802 Pfam Sodium/hydrogen exchanger family 47 426 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Sed07g1579 802 Gene3D - 35 440 IPR038770 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1579 Sed-Chr7:12630883 Sed13g0817 Sed-Chr13:6036165 1.60E-299 dispersed
Sed07g1579 Sed-Chr7:12630883 Sed07g1580 Sed-Chr7:12659718 0.00E+00 tandem
Sed14g0469 Sed-Chr14:4690056 Sed07g1579 Sed-Chr7:12630883 1.90E-213 transposed
Sed13g0816 Sed-Chr13:6035580 Sed07g1579 Sed-Chr7:12630883 3.00E-301 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1579 K26731 - csv:101203169 1288.48