Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g1609 | ATGGTGAACAAGCAAGCTTCTTTCATGGTTTGTGTTTTGATGTTTTATGGTTTGTTTTCACTGATTTTGTACAAACCCATGGCCGAAGCTGATGACCAAACTCGAAAGGTTTACATGGTTTACCTCGGAGAAAGGAAATACGAGGATGTTAAATTGACAACCGCATCTCACCATGATTTACTGGCCACTGTATTGGAAAGCAAGGAGAAGTCATGGGAATCAATGGTGTACAGTTATAGACATGGCTTCTCTGGATTTGCAGCCAAGCTCACTAAGTCTCAAGCTCAAAAGCTAAATGAAATGGATGAGGTGGTTCGAGTTCTTCCAAATTCGATATACAAAACGCAGACAACTAGAAGTTGGGATTTTCTTGGGCTCTCCTCATCTTCCTTTGACTCGAACAATCTTCTCTATCGGGCTAAAATGGGCGAAAATATCATTATAGGAGTCATTGATTCAGGAATCTGGCCAGAGTCAGAAGCATTCAACGACAAAGAATTGGGCCCAATCCCATCACGATGGCAAGGCAAATGTGAATCAGGAGCAAAATTCAACTCTACAAATTGCAACAGAAAAATTATAGGCGCACGATCCTTCTCAGATGGATTCATAGCAAGCTTTGGCAAAGAAGCACTAGCCAGTGAATACTTATCCCCACGAGATTTCAATGGGCATGGAACCCACGTCGCCAGCACAGCCGCGGGTTATTTTGTAACAAACGTCAGCTACCATGGTTCCGGAGTGGGCACAGTAAGGGGCGGTGCGCCACTTGCACGCTTAGCCATATACAAGGCTTTGTGGGGCACTACGGGTTCAGGGACAATTGTGGACATAATGAAGGCCATAGATGAGGCCATTCACGACGGTGTTGATGTACTATGCATGTCACTTGGGATTAAAGTTCCTCTATATCCAGAGTTCAGTGAGCAAAACGGAATTGCAATCGGGTCATTCCATGCCATTGCAAAAGGGATTCATGTTGTGTGCGCAGGTGGCAATGAGGGTCCTTATCAGCAAACAGTGTTGAACACGGCGCCATGGATTTTGACAGTGGCTGCAAGTACAATGGACAGAGCCTTTCTTTCCTCTATAACTCTTCTCGGGGATAATACCACTTATTTTGGCCAGAGCCTGATCGATTCGGAAGATCTTGTCGTCGAGCTGGCGCTTCCTCCGACTGGCAGATGTGATGGAGTTTCGAGAAATGATAGTTCCATAACTGGGAAAGTGGTTTTGTGCTTCGCTGATGAGGCTGATGCGAAGACTACAACGACGGCGGGGATGGAAGTGTCAGAAGCAAATGGAAGTGGGATAATAGTCGCCGGCCAACATGATGATATATTGGTTCCTTGTGCTAAACCATCTCCATGTATCTTAGTAGTGGATACTGATATTGGCACTAAACTACATTTTTATGCCTTAGCACACAGTAAACCAATGGTAAGGATAAGGCGCGCAAAAACCATAATCGGCAAGCCCATATCAACAAGGATTGCTTACTTTTCATCTAGAGGTCCAAATTCTGCTTCACCTGCTATTCTTAAGCCAGACATAGCCGCTCCTGGGTCCAACATTCTAGCCGCCATTTCACCGGACAATGTATTGAACGACAAGGGGTTTGCAATGCAATCAGGAACTTCCATGGCCGCACCTCATATTGCTGGCATTGTTGCTCTTCTCAAATTTGTGTATCCTACTTGGTCACCTGCTGCAATTAAATCGGCTCTTATCACAACAGGGCGTGATCAGGATCCTTCTGGATTGTCTATCTTTGCTGAGAGCTCCCCTCCGAAAGTTGGTGACCCGTTCGACTACGGCGGTGGAGTGGTTGACCCCAACGCCGCCGCCGACCCAGGTCTCGTCTACGATTTGAACATTACAGATTACATACATTACTTGTGCGGTATGGGTTATATGGACTCCGACATTCATCGCTTAACGAAGGAAAAAACAAAATGCCCATTGCGAAGGCCTTCAATATTGGATTTGAATTTGCCAACCATTACAATACCTACACTCACAAACTCCACCACCGTGACTCGGACAGTGACAAATGTAGGGAACTTGACCTCTGTTTATAGGGCAGTGATTAATGCTCCACGAGGAACTAAAGTGACCGTTGACCCTCAAATCTTAGCTTTTAGTTCTAAAGTGAAGAAGATTTCGTTTAAGGTTACCATTTCCACTACCATTCAAAGAAATTATGGGTACTCTTTTGGAACTTTAACTTGGAGCGATGGAGTGCATCTTGTTAAAAGTCCATTGTCGGTTAAAATTGACTTCCTTTGA | 2289 | 44.87 | MVNKQASFMVCVLMFYGLFSLILYKPMAEADDQTRKVYMVYLGERKYEDVKLTTASHHDLLATVLESKEKSWESMVYSYRHGFSGFAAKLTKSQAQKLNEMDEVVRVLPNSIYKTQTTRSWDFLGLSSSSFDSNNLLYRAKMGENIIIGVIDSGIWPESEAFNDKELGPIPSRWQGKCESGAKFNSTNCNRKIIGARSFSDGFIASFGKEALASEYLSPRDFNGHGTHVASTAAGYFVTNVSYHGSGVGTVRGGAPLARLAIYKALWGTTGSGTIVDIMKAIDEAIHDGVDVLCMSLGIKVPLYPEFSEQNGIAIGSFHAIAKGIHVVCAGGNEGPYQQTVLNTAPWILTVAASTMDRAFLSSITLLGDNTTYFGQSLIDSEDLVVELALPPTGRCDGVSRNDSSITGKVVLCFADEADAKTTTTAGMEVSEANGSGIIVAGQHDDILVPCAKPSPCILVVDTDIGTKLHFYALAHSKPMVRIRRAKTIIGKPISTRIAYFSSRGPNSASPAILKPDIAAPGSNILAAISPDNVLNDKGFAMQSGTSMAAPHIAGIVALLKFVYPTWSPAAIKSALITTGRDQDPSGLSIFAESSPPKVGDPFDYGGGVVDPNAAADPGLVYDLNITDYIHYLCGMGYMDSDIHRLTKEKTKCPLRRPSILDLNLPTITIPTLTNSTTVTRTVTNVGNLTSVYRAVINAPRGTKVTVDPQILAFSSKVKKISFKVTISTTIQRNYGYSFGTLTWSDGVHLVKSPLSVKIDFL | 762 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 13226112 | 13246291 | - | Sed0013500.1 | Sed07g1609 | 720473 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g1609 | 762 | FunFam | Subtilisin-like protease SBT5.3 | 27 | 116 | - | - | |
Sed07g1609 | 762 | Pfam | Fibronectin type-III domain | 662 | 757 | IPR041469 | - | |
Sed07g1609 | 762 | Gene3D | - | 633 | 760 | - | - | |
Sed07g1609 | 762 | Pfam | Subtilase family | 143 | 583 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed07g1609 | 762 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 25 | 115 | IPR037045 | - | |
Sed07g1609 | 762 | FunFam | Subtilisin-like protease SBT1.5 | 633 | 760 | - | - | |
Sed07g1609 | 762 | Gene3D | - | 357 | 490 | - | - | |
Sed07g1609 | 762 | Gene3D | Peptidase S8/S53 domain | 145 | 629 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed07g1609 | 762 | CDD | PA_subtilisin_like | 367 | 483 | - | - | |
Sed07g1609 | 762 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 120 | 616 | - | - | |
Sed07g1609 | 762 | CDD | Peptidases_S8_3 | 113 | 579 | IPR034197 | - | |
Sed07g1609 | 762 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 38 | 754 | IPR045051 | - | |
Sed07g1609 | 762 | FunFam | Subtilisin-like protease SBT1.5 | 145 | 368 | - | - | |
Sed07g1609 | 762 | Pfam | Peptidase inhibitor I9 | 37 | 116 | IPR010259 | - | |
Sed07g1609 | 762 | ProSitePatterns | Serine proteases, subtilase family, histidine active site. | 225 | 235 | IPR022398 | - | |
Sed07g1609 | 762 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 545 | 555 | IPR023828 | - | |
Sed07g1609 | 762 | PRINTS | Subtilisin serine protease family (S8) signature | 221 | 234 | IPR015500 | - | |
Sed07g1609 | 762 | PRINTS | Subtilisin serine protease family (S8) signature | 544 | 560 | IPR015500 | - | |
Sed07g1609 | 762 | PRINTS | Subtilisin serine protease family (S8) signature | 143 | 162 | IPR015500 | - | |
Sed07g1609 | 762 | SUPERFAMILY | Subtilisin-like | 13 | 689 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed05g2894 | Sed-Chr5:39932882 | Sed07g1609 | Sed-Chr7:13226112 | 3.00E-143 | dispersed | |
Sed07g1609 | Sed-Chr7:13226112 | Sed07g1612 | Sed-Chr7:13349444 | 0.00E+00 | dispersed | |
Sed07g1609 | Sed-Chr7:13226112 | Sed07g1611 | Sed-Chr7:13296811 | 6.30E-240 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g1609 | - | - | - | 0.0 |