Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1609 ATGGTGAACAAGCAAGCTTCTTTCATGGTTTGTGTTTTGATGTTTTATGGTTTGTTTTCACTGATTTTGTACAAACCCATGGCCGAAGCTGATGACCAAACTCGAAAGGTTTACATGGTTTACCTCGGAGAAAGGAAATACGAGGATGTTAAATTGACAACCGCATCTCACCATGATTTACTGGCCACTGTATTGGAAAGCAAGGAGAAGTCATGGGAATCAATGGTGTACAGTTATAGACATGGCTTCTCTGGATTTGCAGCCAAGCTCACTAAGTCTCAAGCTCAAAAGCTAAATGAAATGGATGAGGTGGTTCGAGTTCTTCCAAATTCGATATACAAAACGCAGACAACTAGAAGTTGGGATTTTCTTGGGCTCTCCTCATCTTCCTTTGACTCGAACAATCTTCTCTATCGGGCTAAAATGGGCGAAAATATCATTATAGGAGTCATTGATTCAGGAATCTGGCCAGAGTCAGAAGCATTCAACGACAAAGAATTGGGCCCAATCCCATCACGATGGCAAGGCAAATGTGAATCAGGAGCAAAATTCAACTCTACAAATTGCAACAGAAAAATTATAGGCGCACGATCCTTCTCAGATGGATTCATAGCAAGCTTTGGCAAAGAAGCACTAGCCAGTGAATACTTATCCCCACGAGATTTCAATGGGCATGGAACCCACGTCGCCAGCACAGCCGCGGGTTATTTTGTAACAAACGTCAGCTACCATGGTTCCGGAGTGGGCACAGTAAGGGGCGGTGCGCCACTTGCACGCTTAGCCATATACAAGGCTTTGTGGGGCACTACGGGTTCAGGGACAATTGTGGACATAATGAAGGCCATAGATGAGGCCATTCACGACGGTGTTGATGTACTATGCATGTCACTTGGGATTAAAGTTCCTCTATATCCAGAGTTCAGTGAGCAAAACGGAATTGCAATCGGGTCATTCCATGCCATTGCAAAAGGGATTCATGTTGTGTGCGCAGGTGGCAATGAGGGTCCTTATCAGCAAACAGTGTTGAACACGGCGCCATGGATTTTGACAGTGGCTGCAAGTACAATGGACAGAGCCTTTCTTTCCTCTATAACTCTTCTCGGGGATAATACCACTTATTTTGGCCAGAGCCTGATCGATTCGGAAGATCTTGTCGTCGAGCTGGCGCTTCCTCCGACTGGCAGATGTGATGGAGTTTCGAGAAATGATAGTTCCATAACTGGGAAAGTGGTTTTGTGCTTCGCTGATGAGGCTGATGCGAAGACTACAACGACGGCGGGGATGGAAGTGTCAGAAGCAAATGGAAGTGGGATAATAGTCGCCGGCCAACATGATGATATATTGGTTCCTTGTGCTAAACCATCTCCATGTATCTTAGTAGTGGATACTGATATTGGCACTAAACTACATTTTTATGCCTTAGCACACAGTAAACCAATGGTAAGGATAAGGCGCGCAAAAACCATAATCGGCAAGCCCATATCAACAAGGATTGCTTACTTTTCATCTAGAGGTCCAAATTCTGCTTCACCTGCTATTCTTAAGCCAGACATAGCCGCTCCTGGGTCCAACATTCTAGCCGCCATTTCACCGGACAATGTATTGAACGACAAGGGGTTTGCAATGCAATCAGGAACTTCCATGGCCGCACCTCATATTGCTGGCATTGTTGCTCTTCTCAAATTTGTGTATCCTACTTGGTCACCTGCTGCAATTAAATCGGCTCTTATCACAACAGGGCGTGATCAGGATCCTTCTGGATTGTCTATCTTTGCTGAGAGCTCCCCTCCGAAAGTTGGTGACCCGTTCGACTACGGCGGTGGAGTGGTTGACCCCAACGCCGCCGCCGACCCAGGTCTCGTCTACGATTTGAACATTACAGATTACATACATTACTTGTGCGGTATGGGTTATATGGACTCCGACATTCATCGCTTAACGAAGGAAAAAACAAAATGCCCATTGCGAAGGCCTTCAATATTGGATTTGAATTTGCCAACCATTACAATACCTACACTCACAAACTCCACCACCGTGACTCGGACAGTGACAAATGTAGGGAACTTGACCTCTGTTTATAGGGCAGTGATTAATGCTCCACGAGGAACTAAAGTGACCGTTGACCCTCAAATCTTAGCTTTTAGTTCTAAAGTGAAGAAGATTTCGTTTAAGGTTACCATTTCCACTACCATTCAAAGAAATTATGGGTACTCTTTTGGAACTTTAACTTGGAGCGATGGAGTGCATCTTGTTAAAAGTCCATTGTCGGTTAAAATTGACTTCCTTTGA 2289 44.87 MVNKQASFMVCVLMFYGLFSLILYKPMAEADDQTRKVYMVYLGERKYEDVKLTTASHHDLLATVLESKEKSWESMVYSYRHGFSGFAAKLTKSQAQKLNEMDEVVRVLPNSIYKTQTTRSWDFLGLSSSSFDSNNLLYRAKMGENIIIGVIDSGIWPESEAFNDKELGPIPSRWQGKCESGAKFNSTNCNRKIIGARSFSDGFIASFGKEALASEYLSPRDFNGHGTHVASTAAGYFVTNVSYHGSGVGTVRGGAPLARLAIYKALWGTTGSGTIVDIMKAIDEAIHDGVDVLCMSLGIKVPLYPEFSEQNGIAIGSFHAIAKGIHVVCAGGNEGPYQQTVLNTAPWILTVAASTMDRAFLSSITLLGDNTTYFGQSLIDSEDLVVELALPPTGRCDGVSRNDSSITGKVVLCFADEADAKTTTTAGMEVSEANGSGIIVAGQHDDILVPCAKPSPCILVVDTDIGTKLHFYALAHSKPMVRIRRAKTIIGKPISTRIAYFSSRGPNSASPAILKPDIAAPGSNILAAISPDNVLNDKGFAMQSGTSMAAPHIAGIVALLKFVYPTWSPAAIKSALITTGRDQDPSGLSIFAESSPPKVGDPFDYGGGVVDPNAAADPGLVYDLNITDYIHYLCGMGYMDSDIHRLTKEKTKCPLRRPSILDLNLPTITIPTLTNSTTVTRTVTNVGNLTSVYRAVINAPRGTKVTVDPQILAFSSKVKKISFKVTISTTIQRNYGYSFGTLTWSDGVHLVKSPLSVKIDFL 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13226112 13246291 - Sed0013500.1 Sed07g1609 720473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1609 762 FunFam Subtilisin-like protease SBT5.3 27 116 - -
Sed07g1609 762 Pfam Fibronectin type-III domain 662 757 IPR041469 -
Sed07g1609 762 Gene3D - 633 760 - -
Sed07g1609 762 Pfam Subtilase family 143 583 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed07g1609 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 115 IPR037045 -
Sed07g1609 762 FunFam Subtilisin-like protease SBT1.5 633 760 - -
Sed07g1609 762 Gene3D - 357 490 - -
Sed07g1609 762 Gene3D Peptidase S8/S53 domain 145 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed07g1609 762 CDD PA_subtilisin_like 367 483 - -
Sed07g1609 762 ProSiteProfiles Serine proteases, subtilase domain profile. 120 616 - -
Sed07g1609 762 CDD Peptidases_S8_3 113 579 IPR034197 -
Sed07g1609 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 754 IPR045051 -
Sed07g1609 762 FunFam Subtilisin-like protease SBT1.5 145 368 - -
Sed07g1609 762 Pfam Peptidase inhibitor I9 37 116 IPR010259 -
Sed07g1609 762 ProSitePatterns Serine proteases, subtilase family, histidine active site. 225 235 IPR022398 -
Sed07g1609 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Sed07g1609 762 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Sed07g1609 762 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Sed07g1609 762 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Sed07g1609 762 SUPERFAMILY Subtilisin-like 13 689 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2894 Sed-Chr5:39932882 Sed07g1609 Sed-Chr7:13226112 3.00E-143 dispersed
Sed07g1609 Sed-Chr7:13226112 Sed07g1612 Sed-Chr7:13349444 0.00E+00 dispersed
Sed07g1609 Sed-Chr7:13226112 Sed07g1611 Sed-Chr7:13296811 6.30E-240 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1609 - - - 0.0