Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1662 ATGGCTACGCTGCTCGAGCCACCGGATGGAAAAGGAACGAAGGGGAAGCATTGTTACACAATGTGGAAAACTCTGTTTGAAATTGACACCAAGTATATTCCTATCAAGCCCATTGGGCGAGGAGCCTACGGCATGGTGTGTTCTTCGATCAATCGAGAGACCAACGAGAAAGTGGCGATTAAGAAGATTATCGACGTGTTTGCAAATGGCGTCGACGCCGTGAGAACGTTGAGGGAGATGAAGATTTTGAGGCATGTTAGACATGAGAATGTGATTGGTTTGAAGGATGTTATGATGCCGAGTCAAGGTTTAAGAGTTATCAAATCCTCAAGTTATCAAGTTATCGCCGTGTATTTGGTTTATGAGCTTATGGATACTGATCTTCTTCAAGTTATCAAATCCTCTCATCCACTTTCTCTATATCATATCCAGTATTTTATGTATCAGTTGCTTTGCGGCTTGCAGTATCTTCATTCAGCAAACATTCTTCACCGCGACTTGAAGCCCGAGAACCTCCTTGTCAATGCTAACTGCAACCTCAAGATTTGTGATTTCGGACTGGCACAAACGAGAATAGGCACCAAGCACCAGGTCATGACTGAATATGTTGCTACTCGCTGGTTTCGCGCACCCGAGCTTCTCCTCTGCTGTGACAACTATGGAACTTCCATTGATGTATGGTCTGTGGGATGCATATTTGCTGAGATTCTCGGTCGAAAACCTATCTTCCCGGGGACGGACCCCTTGAACCAACACAACTTAATCATTAATATTCTTGGTAGTCCAAAGGAGGCAGATCTCGGGTTTATCAACAGTTTAAAGGGTAGAAAATTTATTGAGAAGATGCCCTTTTCTAGAGGAAGGAAACTTTCAGATCTATATCCACAAGCTGAACCTTTAGCTTTGGACTTGCTGCAGAGGATGCTCATGTTTGATCCATCGAAGAGAATTACTGTCGATGAAGCACTTCGACATCCATACATGTTGGGGCTGTACGATCCAACATTGAATCCTCCTGCTGATGTTTGCCTCGTTCTCGACGTAAACGAACCACTTGGGGATTGTGATATGAGGGAAATGATGTTGAATGAGATGCTTTATTACCATTCTGAAGCTGCTCCTACCTATTCTGTCCGTAGATGCGCTTCTTAA 1152 43.84 MATLLEPPDGKGTKGKHCYTMWKTLFEIDTKYIPIKPIGRGAYGMVCSSINRETNEKVAIKKIIDVFANGVDAVRTLREMKILRHVRHENVIGLKDVMMPSQGLRVIKSSSYQVIAVYLVYELMDTDLLQVIKSSHPLSLYHIQYFMYQLLCGLQYLHSANILHRDLKPENLLVNANCNLKICDFGLAQTRIGTKHQVMTEYVATRWFRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTDPLNQHNLIINILGSPKEADLGFINSLKGRKFIEKMPFSRGRKLSDLYPQAEPLALDLLQRMLMFDPSKRITVDEALRHPYMLGLYDPTLNPPADVCLVLDVNEPLGDCDMREMMLNEMLYYHSEAAPTYSVRRCAS 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14213741 14215584 + Sed0027429.1 Sed07g1662 720526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1662 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1662 383 SMART serkin_6 32 328 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1662 383 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524(InterPro)
Sed07g1662 383 Pfam Protein kinase domain 35 328 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1662 383 FunFam Mitogen-activated protein kinase 18 132 - -
Sed07g1662 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 339 IPR050117 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Sed07g1662 383 ProSitePatterns MAP kinase signature. 67 178 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1662 383 Gene3D Transferase(Phosphotransferase) domain 1 124 342 - -
Sed07g1662 383 ProSiteProfiles Protein kinase domain profile. 32 328 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1662 383 SUPERFAMILY Protein kinase-like (PK-like) 24 336 IPR011009 -
Sed07g1662 383 FunFam Mitogen-activated protein kinase 124 354 - -
Sed07g1662 383 Gene3D Phosphorylase Kinase; domain 1 19 123 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1662 Sed-Chr7:14213741 Sed10g1377 Sed-Chr10:29667852 1.90E-136 dispersed
Sed13g1026 Sed-Chr13:8384476 Sed07g1662 Sed-Chr7:14213741 1.80E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79510 PF00069 Pkinase 3.40E-66 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1662 - - - 0.0