Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1667 ATGGCTCGATCTCGAAGTCTTCTCTTTGTCGTTGCACTTCTTGCTTTTGCTTCCGTTTGTTTCGCTCACAAGATGGGTGGTGGCAGCAGCAGCATCGGTTATAGCGGTTATTTGTATCCTCAATTCTATGATCATTCTTGTCCAAGAGCTCAAGAGATTGTGAAATCCATTGTAGCCAAAGCTTTTGCTAAGGAAGCTCGTATTGCTGCTTCATTGATTAGGCTTCATTTCCATGATTGTTTTGTTAAGGGCTGTGATGCTTCAATATTGTTAGACAGCAGTGGTAGAATAGCCAGTGAAAAAAGATCTAATCCAAACAGGAACTCTGCTAGAGGCTTTGAAGTAATTGATGAGATCAAATCTGCCTTAGAAAAGGAATGTCCCCAAATTGTTTCTTGTGCTGATATTTTGGCCATCGCTGCACGAGACTCGACCGTCATTACAGGAGGACCCGGTTGGGAAGTTCCTCTAGGAAGAAGGGACTCAAGAAGAGCAAGTCTAAAGGGCTCTAACAAAGACATCCCAGCCCCAAACAACACATTCCAAACCATTCTCACAAAATTCAAGAGACAAGGCCTTGACATTGTTGATCTTGTTGCTCTTTCTGGAAGCCACACCGTAGGAAACTCTCGGTGCACCAGCTTCAAGCAACGACTCTACAACCAATCTGGCAATGGCCTGCCCGACCCTTCTCTCGATGCATCATACGCTGCTGAATTGCGCAAGCAATGCCCACCATCAGGGGGTGACCAGAACCTCTTTTTCCTTGACTTCGTCAGCCCGACGAGGTTCGACAACTACTACTTCAAGAATCTCTTGGCTGGGAAGGGTCTGCTGAACTCGGACCAAGTCCTCTTGACAAAGAACCGACAATCGGCGGAGTTGGTGAAGGCATATGCAGAGAATACAGAGCTGTTTTTTGAGCAATTTGCCATATCCATGGTTAAGATGGGGAACATTTCTCCTCTCACTGGTTCAAGGGGTGAGATCAGAAACCAATGCAGGAAAGTTAACAAACATTAG 1023 45.65 MARSRSLLFVVALLAFASVCFAHKMGGGSSSIGYSGYLYPQFYDHSCPRAQEIVKSIVAKAFAKEARIAASLIRLHFHDCFVKGCDASILLDSSGRIASEKRSNPNRNSARGFEVIDEIKSALEKECPQIVSCADILAIAARDSTVITGGPGWEVPLGRRDSRRASLKGSNKDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTVGNSRCTSFKQRLYNQSGNGLPDPSLDASYAAELRKQCPPSGGDQNLFFLDFVSPTRFDNYYFKNLLAGKGLLNSDQVLLTKNRQSAELVKAYAENTELFFEQFAISMVKMGNISPLTGSRGEIRNQCRKVNKH 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14402524 14404469 + Sed0003083.1 Sed07g1667 720531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1667 340 SUPERFAMILY Heme-dependent peroxidases 38 338 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 Pfam Peroxidase 54 302 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PANTHER PEROXIDASE 72-RELATED 10 337 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 FunFam Peroxidase 175 317 - -
Sed07g1667 340 Gene3D Peroxidase, domain 2 175 318 - -
Sed07g1667 340 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g1667 340 FunFam Peroxidase 41 183 - -
Sed07g1667 340 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601(InterPro)
Sed07g1667 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Sed07g1667 340 CDD secretory_peroxidase 38 337 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed07g1667 340 Gene3D - 42 338 - -
Sed07g1667 340 ProSiteProfiles Plant heme peroxidase family profile. 37 338 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1667 Sed-Chr7:14402524 Sed13g1017 Sed-Chr13:8299105 3.10E-162 dispersed
Sed08g2365 Sed-Chr8:36911627 Sed07g1667 Sed-Chr7:14402524 1.70E-53 dispersed
Sed05g0316 Sed-Chr5:1941109 Sed07g1667 Sed-Chr7:14402524 2.00E-89 transposed
Sed13g1016 Sed-Chr13:8275705 Sed07g1667 Sed-Chr7:14402524 2.00E-161 wgd
Sed14g1158 Sed-Chr14:20964850 Sed07g1667 Sed-Chr7:14402524 7.60E-142 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1667 K00430 - csv:101223204 560.451