Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1687 ATGAGAGTTCCCGTTTCCAATCACCCATCCTCCATACCCCCCTCTCCTTCTCCTAATCCCAAACTCAATTCCTCCACTTCCGCCACCGCCGTCCCCAGTCCCACTCCCACTCCCACCTCCGCCAACGTGTCTTACGAGCCCAGCTCCGTCCTGGAGCTCCACCGCAGCCCAAGCCCGGTGGCCCCGGCCATGGCCAGCTCTGTGGAGGACCCCCCAAACAACCCTCCTCCTGTGGAGTGGGATGATCACGCCCTCCATAACCTGGACTGGGACTCCATCATGGGCGATTTAGGCCTACACGATGAGTCCAATCCCAATCCCAATCCCAATCCACAATTCTCGGACTTCCTCCTCCACAGCTCCCACCCGTTGGATCATCAGCAATCCCACCTCCTCCCTTCCCCTGATCACTTCCTCCCCTCCGACCATCACCTACCAACCCCCTTCAACTCCCTGGATTCCTTAGAATTCCTGGAGGACATCGTCCGCGCCGCCGACTGCTTCGACTCCAACGACTTCCACCTCGCCCACACCATCCTGGACCGCCTCAACCAGCGCCTCCAATCCTCCACCGGAAAGCCCCTCCACCGCGCCGCCTTCTTCTTCAAGGAGGCCCTCCAATCCCTCCTCTCCCCGTCCTCCAACCACCGCCTCTCCTCCTGGCCCGACATCGTCCACACCATCACAGCCTACAAGGTCTTCTCCGCCATTTCCCCCATCCCCATGTTCTCCCATTTCACCACCAATCAAGCCCTTCTCGAGGCTCTCAACTCCTCCTCCTTCCTTCACATCATCGACTTCGATATCGGCTTCGGCGGCCAGTACGCCTCCTTCATGAAGGAGATCGCAGAGAAAGCAGAGTCCAGGAACATCGTCCCCCCCGTCCTCCGGATCACCGCCATCGTGGCCGAGGACTTCGTGATTGAGTCTCGTTTGATTAGGGACAATCTATCCCAATTCGCTCTCGATTTGAAGATCCGGTTTCATATCGATCTCCTCCCAATTCGGACTTTCGAGACTCTGTCTTTCAAATCGGTCAAATTCATGGAAGGGGAGAAAACGGCCATTCTCCTGACGCCCGCCATCTTCCGGCGCCTCGGGAGTATTAATACAATTGGCTCCTTTCTCGCCGACGTGCGGCGGGTTTCTCCCTGCGTCGTGGTGTTCGTCGACGGCGAAGGGTGGTCGGACTCCGGGGCCGCGTCGTTCAAGAGGAATTTGGTGGATAGCCTTGAGTTTTACGCGATGATGATGGAGTCCCTGGATGCCTCGGCGGCCGGCGGGGACTGGGTGCGGAGGATCGAGACGTTCGTGCTGCGGCCCAAGATACTGGCGGCGGTGGAAGGGGCCGGGAGAATGGCGGCGCCGCCGTGGAGGGAGGTGTTCCACGGCGCCGGGATGAGGCCGGTGGGGCTCAGCCAGTTTGCGGATTTTCAGGCGGAGTGCTTACTTGGCAAAGTACAGGTTAGGGGGTTCCAAGTAGGCAAACGCCATGCTGAGCTGGTGCTGTGCTGGCACGAGAGGCCTCTTGTTGCCACATCAGCATGGCGGTGTTAA 1557 59.41 MRVPVSNHPSSIPPSPSPNPKLNSSTSATAVPSPTPTPTSANVSYEPSSVLELHRSPSPVAPAMASSVEDPPNNPPPVEWDDHALHNLDWDSIMGDLGLHDESNPNPNPNPQFSDFLLHSSHPLDHQQSHLLPSPDHFLPSDHHLPTPFNSLDSLEFLEDIVRAADCFDSNDFHLAHTILDRLNQRLQSSTGKPLHRAAFFFKEALQSLLSPSSNHRLSSWPDIVHTITAYKVFSAISPIPMFSHFTTNQALLEALNSSSFLHIIDFDIGFGGQYASFMKEIAEKAESRNIVPPVLRITAIVAEDFVIESRLIRDNLSQFALDLKIRFHIDLLPIRTFETLSFKSVKFMEGEKTAILLTPAIFRRLGSINTIGSFLADVRRVSPCVVVFVDGEGWSDSGAASFKRNLVDSLEFYAMMMESLDASAAGGDWVRRIETFVLRPKILAAVEGAGRMAAPPWREVFHGAGMRPVGLSQFADFQAECLLGKVQVRGFQVGKRHAELVLCWHERPLVATSAWRC 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15118360 15120197 - Sed0013118.1 Sed07g1687 720551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1687 518 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 130 516 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Sed07g1687 518 Pfam GRAS domain family 159 517 IPR005202 -
Sed07g1687 518 MobiDBLite consensus disorder prediction 21 51 - -
Sed07g1687 518 MobiDBLite consensus disorder prediction 96 118 - -
Sed07g1687 518 ProSiteProfiles GRAS family profile. 148 517 IPR005202 -
Sed07g1687 518 MobiDBLite consensus disorder prediction 103 118 - -
Sed07g1687 518 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2273 Sed-Chr4:36479845 Sed07g1687 Sed-Chr7:15118360 3.50E-59 dispersed
Sed07g1687 Sed-Chr7:15118360 Sed10g0914 Sed-Chr10:7131592 5.50E-22 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
39110 PF03514 GRAS 1.00E-87 CL0063 Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1687 K27747 - csv:116401665 706.057