Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed07g1699 | ATGTTTCATCCACACCTCATACTCTGTTTTCTCCCCTCTGTTTTAGCTCTCTTCCTCTTTCTCGTTCTCCTCCGACGGAAGAAAACCGCCGCCGACCTCCCTCCGGGGAGCATGGGATGGCCGTTTCTCGGCGAGACCATCGGTTATCTCCGGCCGTACTCCGTGACCACCATCGGAGATTTCATGGAAGATCACATCAAGAGGTATGGCAAAGTGTACAAGTCGAACCTGTTCGGAGAAGCGACGGTGGTGTCGGCCGACCCGGGGCTGAACCGGTACATACTGCAGAACGAAGGGCGGGTGTTCGAATGCAGCTACCCTCGGAGCATCGGCGGGATCCTTGGGAAGTGGTCGATGCTGGTCACCGTCGGCGAGATGCACCGGGACATGAGGATGATATCGCTCAACTTTCTGAGCCAGAGCCGCCTCAAGACTCATCTCTTCAAGGAGGTTGAGAACCACACTCTGCTGGTCCTCCGTTCCTGGAAAGATTCGTCCACGTTTTTGGCGCAGGACGAAGCCAAAAAGTTCACTTTTAATTTAATGGCGAAGCATATCATGAGTTTGGATCCGTGGAAGTTGGAGACGGAGATGCTGAAGAAGGAGTACGTGACTTTCATGAAAGGAGTGATTTCTCCGCCGCTGAATTTTCCTGGAACGCCGTACAGAAGAGCTTTGAAGTCTCGATCGACGATCTTGAAGTTCATCGAGCTGAAGATGGAGGAACGGAAGGCGAAAATGGAAGCCGACGGCGGGGAATTCGAGGATGATGATCTACTGGGGTGGGCATTGAAGCACTCGAATCTGTCCACGGAGCAAATCCTGGACCTGATTCTAAGCCTGCTGTTCGCCGGCCACGAGACGTCCTCCGTCGCCATAGCTTTAGCGATCTTCTTCCTCTCCGGAAGCCCGACCACCGTCCAACAGTTGACGGAAGAACATCTGGAGATCGCGCGAGCGAACAAACGATTGGGGAAGACGGGATTGGATTGGGAAGATTACAAGAAAATGGAATTCACGCAATGTGTGATTAACGAGACGCTTCGGCTTGGAAACGTGGTCAGGTTTCTTCACAGAAAGGCGCTGAAGGATGTACGGTACAGAGGTTACTTTATTCCACGTGGATGGAAAGTGCTTCCTGTGATTTCTGCAGCGCATTTGGATTCTTCGGTATTTGACCAACCACATCACTTCAATCCATGGAGGTGGCAGCAAATAAATGGATCCCCATCGAGCAGTTCGAGCACGACGGTAGCCAATAATTTCATGCCATTTGGCGGCGGACCAAGACTATGCACTGGTTCAGAACTAGCCAAGCTTGAAATGGCCATTTTTATTCATCACTTGGTCTTGAACTATCAATGGGAGTTGGTTGGTTCAGATCAAGCTTTTGCTTACCCTTTTGTTGACTTTCCTAAAGGTCTGCCAATCAGAGTCCGCCAGCACACTCTTGTGTAA | 1458 | 51.17 | MFHPHLILCFLPSVLALFLFLVLLRRKKTAADLPPGSMGWPFLGETIGYLRPYSVTTIGDFMEDHIKRYGKVYKSNLFGEATVVSADPGLNRYILQNEGRVFECSYPRSIGGILGKWSMLVTVGEMHRDMRMISLNFLSQSRLKTHLFKEVENHTLLVLRSWKDSSTFLAQDEAKKFTFNLMAKHIMSLDPWKLETEMLKKEYVTFMKGVISPPLNFPGTPYRRALKSRSTILKFIELKMEERKAKMEADGGEFEDDDLLGWALKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLSGSPTTVQQLTEEHLEIARANKRLGKTGLDWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYRGYFIPRGWKVLPVISAAHLDSSVFDQPHHFNPWRWQQINGSPSSSSSTTVANNFMPFGGGPRLCTGSELAKLEMAIFIHHLVLNYQWELVGSDQAFAYPFVDFPKGLPIRVRQHTLV | 485 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 15411770 | 15417804 | - | Sed0016044.1 | Sed07g1699 | 720563 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed07g1699 | 485 | SUPERFAMILY | Cytochrome P450 | 31 | 480 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | FunFam | Cytochrome P450 90B1 | 23 | 481 | - | - | |
| Sed07g1699 | 485 | CDD | CYP90-like | 65 | 479 | - | - | |
| Sed07g1699 | 485 | PRINTS | P450 superfamily signature | 432 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | PRINTS | P450 superfamily signature | 284 | 301 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | PRINTS | P450 superfamily signature | 342 | 353 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | PANTHER | CYTOCHROME P450 26 | 33 | 458 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Sed07g1699 | 485 | Pfam | Cytochrome P450 | 34 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | PRINTS | E-class P450 group I signature | 341 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | PRINTS | E-class P450 group I signature | 381 | 405 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | PRINTS | E-class P450 group I signature | 422 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | PRINTS | E-class P450 group I signature | 66 | 85 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | PRINTS | E-class P450 group I signature | 273 | 290 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | PRINTS | E-class P450 group I signature | 432 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1699 | 485 | Gene3D | Cytochrome P450 | 24 | 480 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed03g0104 | Sed-Chr3:637283 | Sed07g1699 | Sed-Chr7:15411770 | 9.00E-99 | dispersed | |
| Sed03g0105 | Sed-Chr3:637283 | Sed07g1699 | Sed-Chr7:15411770 | 2.90E-73 | dispersed | |
| Sed07g1699 | Sed-Chr7:15411770 | Sed07g1701 | Sed-Chr7:15411770 | 6.40E-198 | dispersed | |
| Sed07g1699 | Sed-Chr7:15411770 | Sed07g1700 | Sed-Chr7:15411770 | 2.60E-215 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed07g1699 | K09587 | - | csv:101211854 | 861.677 |