Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed07g1700 | ATGCTGGTCACCGTCGGCGAGATGCACCGGGACATGAGGATGATATCGCTCAACTTTCTGAGCCAGAGCCGCCTCAAGACTCATCTCTTCAAGGAGGTTGAGAACCACACTCTGCTGGTCCTCCGTTCCTGGAAAGATTCGTCCACGTTTTTGGCGCAGGACGAAGCCAAAAAGTTCACTTTTAATTTAATGGCGAAGCATATCATGAGTTTGGATCCGTGGAAGTTGGAGACGGAGATGCTGAAGAAGGAGTACGTGACTTTCATGAAAGGAGTGATTTCTCCGCCGCTGAATTTTCCTGGAACGCCGTACAGAAGAGCTTTGAAGTCTCGATCGACGATCTTGAAGTTCATCGAGCTGAAGATGGAGGAACGGAAGGCGAAAATGGAAGCCGACGGCGGGGAATTCGAGGATGATGATCTACTGGGGTGGGCATTGAAGCACTCGAATCTGTCCACGGAGCAAATCCTGGACCTGATTCTAAGCCTGCTGTTCGCCGGCCACGAGACGTCCTCCGTCGCCATAGCTTTAGCGATCTTCTTCCTCTCCGGAAGCCCGACCACCGTCCAACAGTTGACGGAAGAACATCTGGAGATCGCGCGAGCGAACAAACGATTGGGGAAGACGGGATTGGATTGGGAAGATTACAAGAAAATGGAATTCACGCAATGTGTGATTAACGAGACGCTTCGGCTTGGAAACGTGGTCAGGTTTCTTCACAGAAAGGCGCTGAAGGATGTACGGTACAGAGGTTACTTTATTCCACGTGGATGGAAAGTGCTTCCTGTGATTTCTGCAGCGCATTTGGATTCTTCGGTATTTGACCAACCACATCACTTCAATCCATGGAGGTGGCAGCAAATAAATGGATCCCCATCGAGCAGTTCGAGCACGACGGTAGCCAATAATTTCATGCCATTTGGCGGCGGACCAAGACTATGCACTGGTTCAGAACTAGCCAAGCTTGAAATGGCCATTTTTATTCATCACTTGGTCTTGAACTATCAATGGGAGTTGGTTGGTTCAGATCAAGCTTTTGCTTACCCTTTTGTTGACTTTCCTAAAGGTCTGCCAATCAGAGTCCGCCAGCACACTCTTGTGTAA | 1104 | 49.37 | MLVTVGEMHRDMRMISLNFLSQSRLKTHLFKEVENHTLLVLRSWKDSSTFLAQDEAKKFTFNLMAKHIMSLDPWKLETEMLKKEYVTFMKGVISPPLNFPGTPYRRALKSRSTILKFIELKMEERKAKMEADGGEFEDDDLLGWALKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLSGSPTTVQQLTEEHLEIARANKRLGKTGLDWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYRGYFIPRGWKVLPVISAAHLDSSVFDQPHHFNPWRWQQINGSPSSSSSTTVANNFMPFGGGPRLCTGSELAKLEMAIFIHHLVLNYQWELVGSDQAFAYPFVDFPKGLPIRVRQHTLV | 367 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 15411770 | 15417804 | - | Sed0016044.2 | Sed07g1700 | 720564 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed07g1700 | 367 | FunFam | Ent-kaurenoic acid oxidase 1 | 303 | 366 | - | - | |
| Sed07g1700 | 367 | CDD | CYP90-like | 1 | 361 | - | - | |
| Sed07g1700 | 367 | PRINTS | P450 superfamily signature | 224 | 235 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | PRINTS | P450 superfamily signature | 305 | 314 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | PRINTS | P450 superfamily signature | 166 | 183 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | PRINTS | P450 superfamily signature | 314 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | Pfam | Cytochrome P450 | 3 | 340 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | Gene3D | Cytochrome P450 | 1 | 362 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | SUPERFAMILY | Cytochrome P450 | 4 | 362 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | PRINTS | E-class P450 group I signature | 263 | 287 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | PRINTS | E-class P450 group I signature | 223 | 241 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | PRINTS | E-class P450 group I signature | 314 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | PRINTS | E-class P450 group I signature | 304 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | PRINTS | E-class P450 group I signature | 155 | 172 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1700 | 367 | PANTHER | CYTOCHROME P450 26 | 4 | 340 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed07g1700 | Sed-Chr7:15411770 | Sed07g2562 | Sed-Chr7:41160663 | 1.60E-71 | dispersed | |
| Sed07g1699 | Sed-Chr7:15411770 | Sed07g1700 | Sed-Chr7:15411770 | 2.60E-215 | tandem | |
| Sed07g1700 | Sed-Chr7:15411770 | Sed07g1701 | Sed-Chr7:15411770 | 2.50E-125 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed07g1700 | K09587 | - | csv:101211854 | 664.84 |