Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1702 ATGGCTTCCTCTTCTTCTCCCCCTCCTAATTCCTCCTTCGCCGTTTCTGCTTCCGCCGCCTTCTCCGACCCCTTCCACGTCGCCGGACTCTCCGACTCCGCCGACCCCCCTTTTCATTTTCCCAATCTCCACCATCCCTCCGCCGCTTTTCGATTCTTTCCCAACTTCGGCGACGACTCGGACGACTGGATCGATGGTTTGGTCGGCGCCGGAGATTCCACTGCTACCTCTTCTCTGCCCTCTGACTTTGCTCTCTACGCCGCAGATCCATTTCATGCCAGTCCGACTCGACTCACTGAGTTCAACCCTGTTCTTCTCCCGGAATGTGCCCTTCCGCCGCCCTGGACTCCGCCTCCGCTGCCGCTGAAAGATGCGAGAGCAGCAAATCCACCGCTGGAGAGCCTCGTCGTTGAAGCCGCGTCGGTTGCGCCGGAAACTGACTCATCGTCGCCGCCGCTTCTGAAATCCTTGCTCGATTGTGCGCGGCTTTGCGATTCCGAGCCGGAAAAGGCCGCTAGAACTCTCGATCGAATCGGTAAATCGTTGCGAGAACATGGAGATCCGATTGAGCGAGTGACGTTTTACTTCGGGGAGGCTCTTCGGAACAGGTTGTCGCCGACGAGGAGAGGCGATTTCTTGGATTCACTAGAGAGCTCCGGCGGCGGTGCTACTTCCGAAGATTTCTTGCTCTCTTACAAAGCGCTGAACGACGCTTGTCCTTACTCCAAGTTCGCACATCTCACAGCGAACCAAGCGATTCTGGAAGCTACGCAGAGAGCGAGTAAAATCCACATTGTCGACTTCGGAATCGTTCAGGGCGTTCAATGGGCGGCGCTTCTGCAGGCTTTGGCATCACGCGCCACCGGAAAGCCAACCAGAGTTCGGATCTCCGGCATACCAGCACCGTCGCTCGGAGATTCACCGGCGGCGTCGCTCTACGCCACCGGCAACAGACTCTCGGATTTCGCGAAGCTTCTGGAATTAAACTTCGAGTTCGAACCGATTCTAACGCCGATTCAAGATGTGGACCAATCGAGCTTCCGCGTTGAATCCGACGAGGTATTGGCCGTGAATTTCATGCTTCAATTGTATAATCTCCTGGATGAGGTTCCGATTGGAGTTCATAACGCTCTCCGATTGGCGAAATCGCTAAACCCTAAAATTATGACTCTAGGCGAATACGAAGCGAGTTTGAACAGGATCGGATTCTACAATCGATTCAAGAACGCATTGAAATACTACTCCGCGGTTTTCGAATCGCTAGATCCAAACTTACCTCGGGACTCGCCGGAAAGACTCCAGTTAGAGAAACTGCTGTTCGGCCGACGAATCGCCGGCGTGGTGGGAACAGAAGAAGAAGAAGATTCAAGAAACAAGAGAAGAGTACGCATGGAAGATAAAGAACAATGGAAGAAATTAATCGAAAGTTCGGGATTCGAAGCTGTAGCGCTCAGCCATTACTCGATTAGTCAGGCGAAAATTCTTCTTTGGAATTACAATTACAGTTCTCATTACTCTCTGATCGAATCGGCGCCGGAATTTCTGACTCTGGCTTGGAACGACTTGCCTAGCAGTGTTCTCATTGGGTCAAGTCTATGGAGGAAGAATTTAAATGTGCTTTCACAATCAAGTACTGAAGTAGAATTTCGGAGCCTTGCCCACGTTGCGAGTGAGTTACTATGTATGAAGTCTCTTCTATCGGAATTTAGAATTGTGTCTTCTACTATTCCCGTTCTTTAG 1740 51.72 MASSSSPPPNSSFAVSASAAFSDPFHVAGLSDSADPPFHFPNLHHPSAAFRFFPNFGDDSDDWIDGLVGAGDSTATSSLPSDFALYAADPFHASPTRLTEFNPVLLPECALPPPWTPPPLPLKDARAANPPLESLVVEAASVAPETDSSSPPLLKSLLDCARLCDSEPEKAARTLDRIGKSLREHGDPIERVTFYFGEALRNRLSPTRRGDFLDSLESSGGGATSEDFLLSYKALNDACPYSKFAHLTANQAILEATQRASKIHIVDFGIVQGVQWAALLQALASRATGKPTRVRISGIPAPSLGDSPAASLYATGNRLSDFAKLLELNFEFEPILTPIQDVDQSSFRVESDEVLAVNFMLQLYNLLDEVPIGVHNALRLAKSLNPKIMTLGEYEASLNRIGFYNRFKNALKYYSAVFESLDPNLPRDSPERLQLEKLLFGRRIAGVVGTEEEEDSRNKRRVRMEDKEQWKKLIESSGFEAVALSHYSISQAKILLWNYNYSSHYSLIESAPEFLTLAWNDLPSSVLIGSSLWRKNLNVLSQSSTEVEFRSLAHVASELLCMKSLLSEFRIVSSTIPVL 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15568187 15572859 + Sed0007493.1 Sed07g1702 720566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1702 579 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 151 533 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Sed07g1702 579 Pfam GRAS domain family 154 534 IPR005202 -
Sed07g1702 579 ProSiteProfiles GRAS family profile. 144 531 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1702 Sed-Chr7:15568187 Sed10g0914 Sed-Chr10:7131592 7.30E-156 dispersed
Sed07g1702 Sed-Chr7:15568187 Sed08g2860 Sed-Chr8:39812224 1.30E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
39116 PF03514 GRAS 7.80E-101 CL0063 Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1702 - - - 0.0