Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1748 ATGGTTGAATTCCACGGAGAAATCCAGGATGAGGAAAACGAAGAGGAGATTATTACTTACGATGATCTTAAGAAACGAATGTGGAAAGACAGACAGAGGCTGAAGAAGATGAAGGAGAATCGCGAGCCAGAATCTGGTGCCAGAGAAGAGGCTTCTCGCCGGAAGAAGATGGCCAGAGCCCAAGACTCCATCCTCAAGTACATGGACAAGATCATGGATGCATGCAAGGCGCAGGGCTTTGTCTACGGGATCGTCCCCCAGAAGGGGAAGCCGGTCACCGGGTCCTCCGAGAGCCTCCGCCAGTGGTGGCGCGACGACGTCCGCTTCGACCTGGGTGCGCCCATGGCCATAGACATAGCCAGGTTTCTGCCCAAAGTGATCCAGGAAACGGGGCTGGATCATGAGTCCTTCCTGCACCTGCTGCAGGAGTTGCAGGACACCACATTGGGGTCCATTCTGTCGGCTCTGATGCAGCACTGCATTCCGCCACAGAGGAAGTTCCCCCTCGACAAGGGACTGGCCCCGCCGTGGTGGCCGACCGGGGAGGAGCTTTGGTGGGGCGAACAAGGCTCCGCGGGCGGCCACGGGGTTCCTCCTTATAAAAAGCCCCACGACCTGAAAAAGGCATGGAAGATCAGTGTGCTGGCCGCCGTGATCAAACACATGTCTCCCGACTTGGAGAACATGAGGAAACTGGTTCGACAATCCAAGAACTTGCAGGCGAAAATGACGGCGAAGGAGACGCTTACTTGGGCTAAAGTGATGAATCAAGAGGAAGCTCTCCTGATATTAACCGAAAAGAGCCTCAAAATCACGGATGACAACAAGGAACGCGAGAACGGAAGAGAAAAGGAGAGGGGTGGGATGATGATGACGAAACGAAAATGCGCATTCGCATTCGAACAAGAAGAAGCAGGAGAGGAATGTGCGCTGTACAGTTGCCTGAACCAATTGTGCCCAGAGGGGGAGGTGCCAGCGCCGGTGTGGTTGGCAGAGAAGAGCGCGAGAATGGAGGAGGAGCCACTGATCGACACGCATTTGAAGAGCGTGGTGGAGTGGATGAACTGGGAGTTGTCACGGGCGGAACCGAGCAGCAGCGAGGGGAGGACCGAGGATGGGTCGGTGGAGGATTACGGGAGCGTGTATTGGAAGGGCGGGGTGGGAGAGGTGGGAGCGGACGAGGCGTTTGAGATGCACAAGGAGGGTATGGATTTGAATGCCAGTCCCACCCAAGTTTTGGGTACTGCGGCTGCCCAACAAGATGCAACTTCCATTTGGGATTTGAGATATGAATGGACTGAAGATTAA 1308 55.2 MVEFHGEIQDEENEEEIITYDDLKKRMWKDRQRLKKMKENREPESGAREEASRRKKMARAQDSILKYMDKIMDACKAQGFVYGIVPQKGKPVTGSSESLRQWWRDDVRFDLGAPMAIDIARFLPKVIQETGLDHESFLHLLQELQDTTLGSILSALMQHCIPPQRKFPLDKGLAPPWWPTGEELWWGEQGSAGGHGVPPYKKPHDLKKAWKISVLAAVIKHMSPDLENMRKLVRQSKNLQAKMTAKETLTWAKVMNQEEALLILTEKSLKITDDNKERENGREKERGGMMMTKRKCAFAFEQEEAGEECALYSCLNQLCPEGEVPAPVWLAEKSARMEEEPLIDTHLKSVVEWMNWELSRAEPSSSEGRTEDGSVEDYGSVYWKGGVGEVGADEAFEMHKEGMDLNASPTQVLGTAAAQQDATSIWDLRYEWTED 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17462282 17463589 + Sed0003324.1 Sed07g1748 720612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1748 435 Coils Coil 20 40 - -
Sed07g1748 435 FunFam Ethylene insensitive 3-like 1 132 269 - -
Sed07g1748 435 Gene3D - 131 268 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Sed07g1748 435 Gene3D - 46 119 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Sed07g1748 435 Pfam Ethylene insensitive 3, DNA-binding domain 21 259 IPR047091 GO:0003700(InterPro)
Sed07g1748 435 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 6 280 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Sed07g1748 435 MobiDBLite consensus disorder prediction 33 55 - -
Sed07g1748 435 SUPERFAMILY DNA-binding domain of EIN3-like 138 262 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1748 Sed-Chr7:17462282 Sed11g1403 Sed-Chr11:29994556 4.40E-81 dispersed
Sed13g0935 Sed-Chr13:7066148 Sed07g1748 Sed-Chr7:17462282 2.90E-133 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
39125 PF04873 EIN3 3.10E-106 No_clan Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1748 K14514 - csv:101210698 569.696