Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1763 ATGGAGGTGGTGGCGATGGTGGTAGCGGCAACATTGATGGTGGTGGCGGCGGCAGTGTCAGAGGTGGTGACGACGGAGATGGCGGCGGCGATGTTAGAAGTGGTGGCGGCGATGGTGGTGGCGGAGGTGGTGACGGCGGAAGCAGCAGCGCCGCAGGTGGGGTTGGTGATGGCGGCGGAGGTGGGGGCAACGACAGCAACAACGGCGGTGGCAGAGGCGGTGGTGGCAAGCTTTTCTGGAAATAAGTTGGATTGTGGCAAAAATCCTCATCGTTCCTGTGCTTCAGACAATACAAACCCAGGTACTTCAAATAAGTTGAAGGTTGGACTTATAGCTGGACCTATTGCTGGGTTAATAGTCGCTCTTCTTTTGGTCGGATTGTTTTTTTTCTTGTGCAAGTGTACATATCAAGGCTACAAGGGTGACGACTTTGTAGATGTTCCCGGTGAAATTGATCGAAGAATTGCATTTGGTCAGCTGAAAAGATTTTCATGGAGGGAATTACAGCTAGCTACAGAAAACTTCAGTGAGAATAATGTTATAGGACAAGGAGGCTTTGGAAGGGTGTACAAAGGGGTGCTTATTGATGGCACCAAGGTTGCAGTGAAACAGTCAACTAATCATGAAAGCCTTGGGGGAGATTCTGCTTTTCTGCGTGAAGTTGAGATGATTAGTGTAGCTGTTCATAGAAATTTATTGCGGCTGATTGGGTTCTGTACAACTGAAACCGAACGCTTATTGGTATATCCCTTTATGCAGAACTTGAGTGTTGCCTACCATCTTCGAGAGCTTAAACCTGGGGAACCTATTTTAGATTGGCCTACTCGAAAGCGTGTGGCGCTGGGTTCAGCTCGTGGTTTAGGATATCTTCATGAACATTGCAATCCGAAGATTATTCACCGCGATGTTAAGGCTGCTAATGTATTGCTCGATGATGATTTTGAAGCTGTTGTGGGCGACTTCGGCCTAGCAAAGTTGGTTGATGTTAGGAAGACTAATGTGACAACTCTAGTTCGGGGGACGGCAGGCCACATAGCACCAGAGTACTTATCCACTGGAAAGTCATCAGAAAAAACCGATGTTTTTGGTTATGGCATTATGCTTTTAGAACTTGTTACAGGGCAACGTGCAATGGACTTATCATGCTTGGAAGGAGATGATGTTATATTGCTCGACCATGTAAAAAAACTGGAAAGGGAGAACCGGCTCAATGCTATTGTCGATGAAAACCTGAATAGCTATGATATTAGAGAGGTGGAAATGATGATCCAAGTTGCTCTACTGTGCACACAGCCATCGTCGGTCGACCGACCGACAATGTCACAGGTCATTCGGATGCTGGAAGGCGAGGGGCTTGCAGAGAGGTGGGAAGAATGGCAACATTTAGAGGTGGCTCGCCAACAAGAGTATGAGAGAAGGCAAAGAAGATTTGCATCGAGAGATGATTCCATTTATAAACAGGAACCCGACCAGTTGTCTGGTGGAAGATAA 1491 47.22 MEVVAMVVAATLMVVAAAVSEVVTTEMAAAMLEVVAAMVVAEVVTAEAAAPQVGLVMAAEVGATTATTAVAEAVVASFSGNKLDCGKNPHRSCASDNTNPGTSNKLKVGLIAGPIAGLIVALLLVGLFFFLCKCTYQGYKGDDFVDVPGEIDRRIAFGQLKRFSWRELQLATENFSENNVIGQGGFGRVYKGVLIDGTKVAVKQSTNHESLGGDSAFLREVEMISVAVHRNLLRLIGFCTTETERLLVYPFMQNLSVAYHLRELKPGEPILDWPTRKRVALGSARGLGYLHEHCNPKIIHRDVKAANVLLDDDFEAVVGDFGLAKLVDVRKTNVTTLVRGTAGHIAPEYLSTGKSSEKTDVFGYGIMLLELVTGQRAMDLSCLEGDDVILLDHVKKLERENRLNAIVDENLNSYDIREVEMMIQVALLCTQPSSVDRPTMSQVIRMLEGEGLAERWEEWQHLEVARQQEYERRQRRFASRDDSIYKQEPDQLSGGR 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17943920 17949286 - Sed0007081.1 Sed07g1763 720627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1763 496 Gene3D Transferase(Phosphotransferase) domain 1 252 467 - -
Sed07g1763 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1763 496 FunFam Somatic embryogenesis receptor kinase 1 144 251 - -
Sed07g1763 496 FunFam Somatic embryogenesis receptor-like kinase 1 252 467 - -
Sed07g1763 496 Pfam Protein tyrosine and serine/threonine kinase 178 447 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed07g1763 496 SUPERFAMILY Protein kinase-like (PK-like) 155 448 IPR011009 -
Sed07g1763 496 MobiDBLite consensus disorder prediction 474 496 - -
Sed07g1763 496 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 77 494 - -
Sed07g1763 496 ProSitePatterns Protein kinases ATP-binding region signature. 181 203 IPR017441 GO:0005524(InterPro)
Sed07g1763 496 Gene3D Phosphorylase Kinase; domain 1 144 251 - -
Sed07g1763 496 ProSiteProfiles Protein kinase domain profile. 175 452 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g1763 496 SMART serkin_6 175 447 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1763 Sed-Chr7:17943920 Sed13g0949 Sed-Chr13:7181078 8.60E-198 dispersed
Sed07g1763 Sed-Chr7:17943920 Sed07g1764 Sed-Chr7:17989834 1.90E-189 tandem
Sed13g0948 Sed-Chr13:7181078 Sed07g1763 Sed-Chr7:17943920 3.10E-197 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79511 PF00069 Pkinase 4.80E-40 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1763 - - - 0.0