Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed07g1792 | ATGGCTGCCAATTTCACCCTTCTTAATCCGTGTTCGTCATTTTCGAACACCCCATCTTCCGTTCGGAGGAAATTTCGTGCGCAGAGATTAGTATCCACTGCCCCATCTTCCTCTTTTTATCGACAATGTCAAGGAGGTGCTTATGGCTTATGCGTTCTTAAATGTGCTTCTTCAAATGGGAAGGAGCCTGATTCGTTGGATAATGGAGTTAAGAGTGTGGAGCGGCTACTTGAACAGAAACGGCAAGCTGAATTGTCTGCTCGGATTGCTTCTGGAGAATTCACTGTCCAAAAACCTGGTTTCCCATCTGTATTGAGGAGTGGTTTGTCCAAGATGGGTGTTCCGAGTGCGATTCTGGACTCATTATTTACTTTCATTGATGCTCAAGAAGGATATCCCAAGATTCCTGAAGCGAAAGGATCATTAAGTGCAGTTCGTAGTGAGGCATTCTTCATACCTCTGTATGAACTTTATCTCACGTATGGTGGAATATTTAGATTGACCTTTGGGCCAAAGTCATTTTTGATAGTTTCTGATCCTTCCATTGCTAAGCATTTACTGAAGGATAATCCAAAGAATTACTCTAAGGGTATCTTAGCTGAAATTCTAGACTTTGTCATGGGGAAGGGACTTATACCAGCTGATGGGGAGATCTGGCATGTGCGAAGACGGGCTATAGTCCCATCTTTGCATATGAAGTTTGTAGGAGCTATGATTAATCTGTTTGGAGAAGCTGCAGATAGGCTTTGCAAGGAGCTAGATGCTGCAGCATCTGATGGGGTAGATGTGGAAATGGAGTCCCTCTTCTCCCGTCTGACTTTAGATATCATTGGCAAGGCAGTTTTTAACTATGACTTTGACTCACTCACAAATGATACTGGCATAGTTGAGGCTGTTTATACTGTGCTAAGAGAAGCAGAAGATCGCAGTGTTGCGCCAATTCCAGTATGGGAAATTCCAATTTGGAAGGATATTTCACCACGGCAAAAAAGGGTCTCTAAAGCTCTCAAATTGATCAATGACACCCTGGATCAACTAATTGATATATGCAAGAGGATGGTCGATGAGGAGGAGCTGCAGTTTCATGAGGAATATATGAATGAGCAAGATCCTAGCATCCTTCATTTCCTTTTGGCATCAGGAGATGATGTTTCAAGCAAGCAGCTTCGTGATGACTTGATGACTATGCTTATAGCTGGCCATGAAACATCTGCTGCAGTTTTAACATGGACCTTTTATCTTCTTTCTAAGGAGCCTAGGATCATGGCCAAGCTCCAAGAGGAGGTTGATTCGGTCCTTGGGGATCGGTTTCCAACTATTGAGGACATGAAGAAGCTCAAATATGCCACCCGAATAATTAATGAATCCTTGAGGCTTTACCCACAGCCACCTGTTTTAATACGGCGATCTCTTGACAACGATATGCTCGGGAAGTACCCAATAAAGAAGGGTGAGGACATATTTATTTCTGTTTGGAACTTACATCGCAGTCCCAAACTTTGGGATGATGCAGACAAGTTTGATCCAGAAAGGTGGCCCTTGGATGGACCCAATCCAAATGAGACAAATCAAAATTTCAGATATTTGCCTTTTGGTGGTGGACCGCGGAAATGTGTGGGAGACATGTTTGCTTCGTACGAGACTGTAGTAGCACTTGCCATGCTTGTTCGGCGATTTGACTTTCAAATGGCACTTGGAGCACCTCCTGTAAAAATGACAACAGGAGCTACAATTCACACAACAGATGGATTGAAAATGACAGTGACCCGTAGAATGAAACCTCCAATCATACCCTCATTAGACATGCCTGCAATGGTCATCAACTCGCCTGTTGTTGATTCATCCATCGGGTTCTTGAAAGACGAAACACAAATTGTTCAGGAAGAAGGAGAAGTTTCTTCTGCTCATTCCTGA | 1914 | 43.31 | MAANFTLLNPCSSFSNTPSSVRRKFRAQRLVSTAPSSSFYRQCQGGAYGLCVLKCASSNGKEPDSLDNGVKSVERLLEQKRQAELSARIASGEFTVQKPGFPSVLRSGLSKMGVPSAILDSLFTFIDAQEGYPKIPEAKGSLSAVRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHLLKDNPKNYSKGILAEILDFVMGKGLIPADGEIWHVRRRAIVPSLHMKFVGAMINLFGEAADRLCKELDAAASDGVDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRQKRVSKALKLINDTLDQLIDICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRIMAKLQEEVDSVLGDRFPTIEDMKKLKYATRIINESLRLYPQPPVLIRRSLDNDMLGKYPIKKGEDIFISVWNLHRSPKLWDDADKFDPERWPLDGPNPNETNQNFRYLPFGGGPRKCVGDMFASYETVVALAMLVRRFDFQMALGAPPVKMTTGATIHTTDGLKMTVTRRMKPPIIPSLDMPAMVINSPVVDSSIGFLKDETQIVQEEGEVSSAHS | 637 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 19488532 | 19508972 | + | Sed0016129.1 | Sed07g1792 | 720656 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed07g1792 | 637 | PANTHER | CYTOCHROME P450 FAMILY 4 | 127 | 589 | IPR050196 | GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016123(PANTHER) | |
| Sed07g1792 | 637 | Pfam | Cytochrome P450 | 154 | 575 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | CDD | CYP97 | 152 | 585 | - | - | |
| Sed07g1792 | 637 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 531 | 540 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed07g1792 | 637 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | PRINTS | P450 superfamily signature | 399 | 416 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | PRINTS | P450 superfamily signature | 529 | 538 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | PRINTS | P450 superfamily signature | 538 | 549 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | Gene3D | Cytochrome P450 | 131 | 597 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | PRINTS | E-class P450 group I signature | 408 | 434 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | PRINTS | E-class P450 group I signature | 158 | 177 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | PRINTS | E-class P450 group I signature | 450 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | PRINTS | E-class P450 group I signature | 388 | 405 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | PRINTS | E-class P450 group I signature | 538 | 561 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | PRINTS | E-class P450 group I signature | 490 | 514 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | PRINTS | E-class P450 group I signature | 528 | 538 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | SUPERFAMILY | Cytochrome P450 | 146 | 591 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed07g1792 | 637 | FunFam | Carotene epsilon-monooxygenase, chloroplastic | 136 | 593 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed07g1792 | Sed-Chr7:19488532 | Sed13g1043 | Sed-Chr13:8584945 | 0.00E+00 | dispersed | |
| Sed13g1059 | Sed-Chr13:9119606 | Sed07g1792 | Sed-Chr7:19488532 | 0.00E+00 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed07g1792 | K15747 | - | csv:101215492 | 1111.29 |