Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1823 ATGGATAAACAACGCATCTTGTTTCTGTTTGCAGTGGACGCAATGGAGAAAGAACCAGTTTGTGTGACCGGAGCCAATGGGTTCATCGGATCCTGGGTGGTGGCTACGCTGTTGGACGCCGGCTACACCACCATCCACGCCTCAATCTTCCCCGCCTCCGATCCTTCCCATTTGTTCAATCTCAAGGCCGAAGCCAACCCTAATGCCGCCCTTCGGGTCTTCGAAGCCGACGTGATGGACGCCGAGGCTCTGGCCAGGGCTGTGGAGGGCTGCAACGGCGTTTTCCACATTGCCTCGCCTTGCACGCTGGAGGATCCGCTTGATCCGCACACAGAATTGATGGAACCGGCCGTTCAAGGCACTCTCAATGTTCTTCATGCTGCCAAGAAATTTGGAGTCCGCCGTGTTGTTCTTACTTCTTCTATTTCGGCTCTTGTTCCCAACCCCAACTGGCCCTCTCATAAGTCCTTTGATGAATCCTCCTGGACTGACTTGGACTACTGCAAATCGCGCAAGAAATGGTATCCAGTGTCAAAAACATTGGCAGAGAAAGCAGCATGGGAGTTTGTTGAGAAGCATGGAATGGATGTAGTTTCCATCCTGCCAGCCACATGTCTTGGTCCTCTTCTGCAGCCTAAGTTGAATGCGAGTTGCGCCGTATTGCAGCAGTTGCTTCAGGGTTCCAAGGATAGTCAGGAATATCACTGGTTGGGGGCTGTGCATGTCAAAGATATTGCGAGAGCTCAAGTTTTATTATTCGAGTCTCCCACTGCTTCTGGTAGATATCTTTGCACCAACGGTATCTATCAATTTGCCGATTTTGCAGACAAAGTATCAAAAATCTACCCTGAATTTCCTGTTCACAGATTTACCGGAGAAACACAACCCGGCTTGGTTGCATGCAAAGATGCAGCCAAGAGGTTAATTGATCTGGGACTAGTTTTCACTCCTCTTGAAGATGCCATTCAAGATACGGTTGAGAGTCTTAGAAGCAAAGGATTTTTGGAGCAGTGA 1014 49.51 MDKQRILFLFAVDAMEKEPVCVTGANGFIGSWVVATLLDAGYTTIHASIFPASDPSHLFNLKAEANPNAALRVFEADVMDAEALARAVEGCNGVFHIASPCTLEDPLDPHTELMEPAVQGTLNVLHAAKKFGVRRVVLTSSISALVPNPNWPSHKSFDESSWTDLDYCKSRKKWYPVSKTLAEKAAWEFVEKHGMDVVSILPATCLGPLLQPKLNASCAVLQQLLQGSKDSQEYHWLGAVHVKDIARAQVLLFESPTASGRYLCTNGIYQFADFADKVSKIYPEFPVHRFTGETQPGLVACKDAAKRLIDLGLVFTPLEDAIQDTVESLRSKGFLEQ 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21025021 21028244 - Sed0019141.1 Sed07g1823 720687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1823 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 20 328 IPR050425 GO:0016616(PANTHER)
Sed07g1823 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 330 IPR036291 -
Sed07g1823 337 FunFam Cinnamoyl-CoA reductase 1 13 337 - -
Sed07g1823 337 Gene3D - 11 337 - -
Sed07g1823 337 CDD FR_SDR_e 20 313 - -
Sed07g1823 337 Pfam NAD dependent epimerase/dehydratase family 20 258 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1823 Sed-Chr7:21025021 Sed13g1498 Sed-Chr13:20200429 5.10E-85 dispersed
Sed07g1823 Sed-Chr7:21025021 Sed07g0750 Sed-Chr7:5602675 3.10E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1823 - - - 0.0