Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1906 ATGCCAACAGTTTGGATATCCTTGAAGAAATCCTTGCACTGCAAATCACAGCCATCAGAAGTTCATGAGCCAAAAACCAGAAGACAAATAGGAGAAATATTGACAAGAAAAGCAGGAGGGAGATCAGGATGCTCAAGGTCCATAGCAAATCTGAAAGATGTCATCCATGGGGGGAGCAAGAGGCATTTGGATAAGCCCCCAAGTTGCAGCCCAAGATCCATCGGCAGCAGTGAGTTTCTGAACCCAATAACCCACGAAGTGATTCTAAGCAACTCAAGATGCGAGCTCAAAATCACAGGCTTTCGGAGCGGAAACGCCGCCGCCGCTGCAGATCCTCCCTTTGTGGGTACTCTCACACCGGGTACGCCGGGACCGGGTGGGCACCCCGCAATGCATTACTTCAGCCCTTCGCTGAGGTCTTCTTCCAGGAAAAGAGACGGATTTGGTGGTGGTGGCGGCGGTGGTGGAGTTCATATGAGTAACAGAATCTCTTTGGAAACGGAGTTTGGTGGCAACGGATCTTCTTCTGCGGTTACTTGTCATAAATGTGGAGACCACTTCAACAAATGGAATGATGCTGAAGCACACCATCTTTCTAAACATGCTGTGACTGAACTTGTGGAAGGAGATTCATCAAGAAAAATTGTGGAGATCATATGCAGGACAAACTGGTTAAAGTCTGAGAATCAATCTGGTAGAATTGAAAGAGTTCTTAAAGTTCACAACATGCAACGGACACTAGCCCGATTTGAGGAGCATCGCGAGACGGTAAAGACCAAAGCCAGCAAGCTCCCGAAGAAGCATCCTCGGTGTCTTGCAGATGGGAACGAGCTACTGAGATTCTTTGGCACGACAGTTGAATGTCCGCTCGGCCTGAACGGCTCATCGAGCCTATGCCCATCGGAGAAATGCTGTGTTTGCAGGATCATACGTAATGGGTTCTCTGCAAAGACAGAGATGAAAGAAGGAATAGGCGTGTTCACGACGTCCACGAGTGTGAAAGCATTCAACTCGATCGAGGCGTCGGGAGGGGATGGGGCGATGATGAGAAAGGCAATGATAGTTTGCAGGGTGATTGCAGGGAGAGTTCACAGGCCATTGGAGAACATACAAGAAATGGCTGGGCAGACAGGGTTTGATTCATTGGCAGGCAAAGTTGGGCTGCATTCCAATATAGAAGAGCTTTATTTGCTGAATCCTAGAGCTTTGCTTCCATGTTTTGTTGTAATTTGCAAGCCATGA 1242 48.23 MPTVWISLKKSLHCKSQPSEVHEPKTRRQIGEILTRKAGGRSGCSRSIANLKDVIHGGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFRSGNAAAAADPPFVGTLTPGTPGPGGHPAMHYFSPSLRSSSRKRDGFGGGGGGGGVHMSNRISLETEFGGNGSSSAVTCHKCGDHFNKWNDAEAHHLSKHAVTELVEGDSSRKIVEIICRTNWLKSENQSGRIERVLKVHNMQRTLARFEEHRETVKTKASKLPKKHPRCLADGNELLRFFGTTVECPLGLNGSSSLCPSEKCCVCRIIRNGFSAKTEMKEGIGVFTTSTSVKAFNSIEASGGDGAMMRKAMIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLHSNIEELYLLNPRALLPCFVVICKP 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32919466 32922317 + Sed0017155.1 Sed07g1906 720770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1906 413 SUPERFAMILY ADP-ribosylation 203 412 - -
Sed07g1906 413 FunFam C2H2-like zinc finger protein 202 412 - -
Sed07g1906 413 ProSitePatterns Zinc finger C2H2 type domain signature. 180 201 IPR013087 -
Sed07g1906 413 MobiDBLite consensus disorder prediction 57 76 - -
Sed07g1906 413 Gene3D - 203 412 - -
Sed07g1906 413 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 412 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g3174 Sed-Chr4:42478358 Sed07g1906 Sed-Chr7:32919466 1.00E-154 dispersed
Sed07g1906 Sed-Chr7:32919466 Sed13g1157 Sed-Chr13:14248788 2.00E-171 dispersed
Sed07g1906 Sed-Chr7:32919466 Sed03g0822 Sed-Chr3:4918291 1.00E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1906 - - - 0.0