Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1929 ATGCAATTATTTCCGATGCTCTGTCCGAGAGATTTCATCTTCCTTTCCTTTCTTCTTTCTGTCGTTATTTTTTCTAATATTTTTGTTTGCAATGCACAAGACTACATCATTGGCGATCCAGAGGACAACCCTGGTGGCGGCGGGGACGACGATACGAAGGCGAAGGCTAAGGCTAAGGAGGCACCGCCGGAGCAGAACAATTGCAATGGCATATTCATGTCGTACACGTTCATTTCGCGGGAGAAGCTGCTGCCCCACCTGAAGAATGCGACGGCTCAGGCGTGGGGGTTCAAGTCGGAGGCGATGATTCTGAACGCGGGAACGACGGAGCTGAAGGCGTGGAAGATGTACATCGGGTTCCATAACCATGAGATTCTGGTCTCGGCGGACGGGGCGGTGGTGATAGACGGCTCGGACTTCCCCGTGGACGTGGGGAATGGAACCACTCTGGCCGGGTACCCCATGACTGATCTCAAGACCTCCATCGAGACCGCCGGAGATATAAACCAGATTCAGGCAAAGGTTGATCTCACCGGATCGCAGTTTGGCATCAAGCCTCCTGGTGTTCCCATGCCGAGGACCATCCGCCTTGCTAACGATGGCTTTAAGTGCCCTGCGCCTCGTCGTCGTGGAAAAACATCAATGCATGTTTGCTGTAAAAAAGATCCAAAGTTCAAAGTGAAACAGCCGAAGAAAACCAAGTTTTTGGCTCGTCAAAATGGAGATCTCTCACTCACCTATGATGTGATGCAAGCTTATGGAAATAATTATCTTGCTCAAGTTACGATTGACAATAACAATCCACTCGGGCGACTCGACCACTGGAACTTAACCTGGGAATGGATGCGAGGCGAGTTCATTCAAAGCATGAGAGGAGCATATACTCGTACAAGAGACATTTCTCAATGCATTTACGGTCCCACAGGGCAATACTATCAAGATTTCGACTTCACACCGGTCATGAGTTGTGATAAGAGACCCGTGATCACAGATCTACCGGCGACACAAAAGGACGACCCAAAGGTCGGAAAACTTCCTTATTGTTGTAGAAATGGAAGCTTGTTGCCAACACTAATGGATGAGAGCAAAGCAAGGTCTATTTTTCAACTACAAGTCTATAAGCTCCCACCAGACATGAACCGAACGGCTCTTACTCCACCACAAAAATGGAAAATCTCGGGCGTCCTGAACCCGAAATACGTATGTGGGGCTCCGATTCGAGTGGCGCCTTCGGAGTTTCCTGACCCAAGTGGGCTTCAGTCAACGAGTACTTCGATCGCAAGTTGGCAAGTAGTGTGCAACATTACAAAGCCAAAGGTGAAGCAATCAAAATGTTGTGTTTCGTTTTCAGCATACTATAATGACTCTATAATTCCTTGCAATACTTGTGCTTGTGGGTGTGAAGACACGGATACTTGCAATCCAAATGCACACCCAATGCTACTCCCTCCAGAAGCCCTTTTGGTGCCATTTGGTAACAGGACAACAAAGGCAAGAGCTTGGGCTAAAATCAAACACTTTCGTGTTCCAAAGAAGTTGCCTTGTCCCGACAACTGTGGAGTCAGCATCAATTGGCATATCAACTCTGACTATACTAGTGGATGGACAGCAAGAATGACACTCTTCAACTGGGAGGACTATCCGTTTGAGGATTGGTTTACTGCTATACAGATGAACAAGAAGGTCGGTCGCGGGTACGAAAATGTTTACTCGTTCAACGGAACCAGGCTTCCCAACCTCAAAAACACCATCTTCCTCCAAGGCTTGCCTGGTTTAGCATACTTGATGGGAGAGGTGAATGGAACCAATCCTGCTTCTGATCCAAGAGTTCCAGGAAAGCAGCAATCCGTGATCTCATTTACGAAGAAGGGCCTGCACAACATCGACATTCAAAAAGGTGATGGTTTCCCAATCAAAATCATTTTCAATGGCGAAGAATGTGCACTTCCAAAGATGATTCCAAGGGCAAGTTCAGGGGTCCGCTCTCACCACGGTTTCGTGCCTCTCATCTTCATATTAGCCATTACTTTTGCGCTTATATCCGACCGCTTCCAATGTGTTTCAGCCAGCTTGTAG 2076 47.74 MQLFPMLCPRDFIFLSFLLSVVIFSNIFVCNAQDYIIGDPEDNPGGGGDDDTKAKAKAKEAPPEQNNCNGIFMSYTFISREKLLPHLKNATAQAWGFKSEAMILNAGTTELKAWKMYIGFHNHEILVSADGAVVIDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQAKVDLTGSQFGIKPPGVPMPRTIRLANDGFKCPAPRRRGKTSMHVCCKKDPKFKVKQPKKTKFLARQNGDLSLTYDVMQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFIQSMRGAYTRTRDISQCIYGPTGQYYQDFDFTPVMSCDKRPVITDLPATQKDDPKVGKLPYCCRNGSLLPTLMDESKARSIFQLQVYKLPPDMNRTALTPPQKWKISGVLNPKYVCGAPIRVAPSEFPDPSGLQSTSTSIASWQVVCNITKPKVKQSKCCVSFSAYYNDSIIPCNTCACGCEDTDTCNPNAHPMLLPPEALLVPFGNRTTKARAWAKIKHFRVPKKLPCPDNCGVSINWHINSDYTSGWTARMTLFNWEDYPFEDWFTAIQMNKKVGRGYENVYSFNGTRLPNLKNTIFLQGLPGLAYLMGEVNGTNPASDPRVPGKQQSVISFTKKGLHNIDIQKGDGFPIKIIFNGEECALPKMIPRASSGVRSHHGFVPLIFILAITFALISDRFQCVSASL 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33709873 33713326 - Sed0018984.1 Sed07g1929 720793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1929 691 MobiDBLite consensus disorder prediction 40 63 - -
Sed07g1929 691 Pfam COBRA-like protein 257 436 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Sed07g1929 691 MobiDBLite consensus disorder prediction 46 60 - -
Sed07g1929 691 PANTHER COBRA-LIKE PROTEIN 7 15 680 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g1150 Sed-Chr2:48663748 Sed07g1929 Sed-Chr7:33709873 1.30E-217 dispersed
Sed07g1929 Sed-Chr7:33709873 Sed12g2020 Sed-Chr12:31062518 7.60E-27 dispersed
Sed07g1929 Sed-Chr7:33709873 Sed12g0793 Sed-Chr12:4865995 4.20E-219 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1929 - - - 0.0