Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1952 ATGGCGAGACCTTTTAGAAGACGAGGTGTGTTTTCAAGGCCCCCAGATCGCATCCCATTCCGAGCTTCAAAATCTGGATTCATCACAGGGATGAAGCTCAAGGAGAGTTTAACTTATTTGCTATTAGCTCTTCCCTTTGTTGCTTTTGTTTTTATGGTGTTTAGGAACCCTTTGGTGGATCTCTCTCTGGGTTTTGCCGAAGCCAGAGCATTGGAAAGAACGCCCATGAATGGCAGCTTTGAGAGTTCAGGTTCATCAGCAAATGGGTTCTCTCGACTTTCCGATAGAGACAAACTTAATGGAGGCCTTCTCATTCCTGGATTTGATGAAGGATCATGCTTGAGCAGGTATCAATCCAGTTTATACCGAAGAAGTTCAACCCACAAACCTTCTCCTTACCTTCTCTCGAAACTTAGAGACTACGAAACACTTCATCGACACTGTGGGCCTCATACAAAATCTTACGATGAAGCAGTAGAGCAACTCAAATCTGGCAGTAGTGTTAATTTGACTGAGTGTAAATATGTTGTATGGATATCTTATAGTGGCTTGGGAAACAAGATACTCACTTTGGCTTCTTCATTCCTCTATGCCCTTCTTACCAATCGGGTTTTGCTTGTTGACCCAGGGAAGGATATGGCTGATCTATTTTGTGAGCCCTTCCCAGAAAAATCTTGGTTACTTCCTAATGACTTTCCCTTGATGGATCGATTTGGAAAATTTGATTCGAAATCTCCTAAATGCCATGGAAATATGGTGAAGACGAACACTCTAAACACGTCGACAGAATCACTCCCACAGTATCTGTATCTACATTTGACTCATGATTATGATGATCATGATAAACTTTTCTTCTGTGATGAAGAACAGGCTACTTTAGGCCAAGTCCCCTGGCTAATACTCAAGACAGACAACTACTTTGTTCCATCTCTTTTCTTGATCCCATCTTTTGAGCACGAACTGAGTAACTTATTTCCCCGAAAAGACACTGTCTTCCATCACGTTGGCCGGTATCTTTTCCACCCATCGAATCACGTTTGGGGACTAATTACGAGATACTACGAAGCATACTTATCAAGTGCAGATGAAAGAATAGGAATTCAAGTAAGAGTGTTTAATAGTGAGCCAGGACCATTCGAACATATAATGAATCAGATTTTAGGGTGTACTCTTCAGGAGAAGCTACTGCCTGAGGTAGACAAGGAAGGCTCGTCTACCACTCCTTTGGATCGCCCAAGAGTTAAAGCTGTTCTAATGACATCATTAAGCTCTGGATATTATGAAAAAATGAGAACCTTGTTCTGGGAAAACCCGACCACGACCGGAGAGGTCATCGCAGTTTACCAGCCGAGCTACGAAATGTATCAGCAGACAGAGAAGAAAACTCACAACAGGAAAGCATGGGCAGAAATGTACCTTCTGAGTTTGAGTGATGTATTGGTGACCAGTGCATGGTCAACATTTGGCTATGTGGCTCAAGGTCTCGGCGGATTGAAGCCGTGGATTCTTTACAAGGCGGAGAACATGACAACACCTGATCCACCATGTCGTCGGGCGATGTCGATGGAGCCCTGCTTTCATGCGCCTCCATTCTATGACTGCAAGGCAAAGAAAGGAATAGATACTGGTGCAGTTGTTCCCCATGTAAGACATTGTGAAGATATGAGCTGGGGGCTTAAGCTTGTTGATCATGAGGATTTATTTAACATCCACTGA 1716 43.3 MARPFRRRGVFSRPPDRIPFRASKSGFITGMKLKESLTYLLLALPFVAFVFMVFRNPLVDLSLGFAEARALERTPMNGSFESSGSSANGFSRLSDRDKLNGGLLIPGFDEGSCLSRYQSSLYRRSSTHKPSPYLLSKLRDYETLHRHCGPHTKSYDEAVEQLKSGSSVNLTECKYVVWISYSGLGNKILTLASSFLYALLTNRVLLVDPGKDMADLFCEPFPEKSWLLPNDFPLMDRFGKFDSKSPKCHGNMVKTNTLNTSTESLPQYLYLHLTHDYDDHDKLFFCDEEQATLGQVPWLILKTDNYFVPSLFLIPSFEHELSNLFPRKDTVFHHVGRYLFHPSNHVWGLITRYYEAYLSSADERIGIQVRVFNSEPGPFEHIMNQILGCTLQEKLLPEVDKEGSSTTPLDRPRVKAVLMTSLSSGYYEKMRTLFWENPTTTGEVIAVYQPSYEMYQQTEKKTHNRKAWAEMYLLSLSDVLVTSAWSTFGYVAQGLGGLKPWILYKAENMTTPDPPCRRAMSMEPCFHAPPFYDCKAKKGIDTGAVVPHVRHCEDMSWGLKLVDHEDLFNIH 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 34033334 34036594 - Sed0024344.1 Sed07g1952 720816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1952 571 FunFam Galactoside 2-alpha-L-fucosyltransferase 171 222 - -
Sed07g1952 571 Pfam Xyloglucan fucosyltransferase 95 535 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Sed07g1952 571 PANTHER FUCOSYLTRANSFERASE 2-RELATED 38 564 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Sed07g1952 571 Gene3D - 170 220 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g2333 Sed-Chr1:17627005 Sed07g1952 Sed-Chr7:34033334 1.90E-196 dispersed
Sed13g0692 Sed-Chr13:4803175 Sed07g1952 Sed-Chr7:34033334 1.30E-149 transposed
Sed06g1510 Sed-Chr6:39776036 Sed07g1952 Sed-Chr7:34033334 2.10E-266 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1952 K13681 - csv:101216541 969.148