Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1991 ATGTCGTCCGCCGAGAAGGAAAGAGAGAAGCAGGTCTACATGGCCAAACTCTCCGAACAGGCCGAACGCTACGACGAAATGGTGGAGTGTATGAAGAAAGTAGCTAAACTAGATGTTGAGCTGACAGTGGAAGAGAGAAATTTGCTCTCTGTTGGATACAAAAATGTTATAGGTGCTAGGCGAGCCTCTTGGCGTATCATGTCCTCGATTGAACAAAAGGAAGAGTCCAAAAGCAATGAGAATAATGTTAAAATTATTAAGAGTTACCGTCAGAAGGTAGAGGATGAGCTTTGCAAGATCTGCACCGATATTCTGACTATTATTGACAAGCACCTCATCCCTTCTTCTACCTCTTCAGAATCTTCGATTTTCTATTACAAGATGAAAGGTGATTATTACCGATATCTTGCTGAGTTCAAAACAGATCAAGAGAGAAAGGACGCAGCTGACCAGTCATTGAAGGGATACGAGACTGCATCAACCACCGCAAATACCGAACTCCCATCAACCCATCCGATCCGTCTCGGCCTTGCTCTCAACTTTTCTGTCTTTTACTATGAGATTATGAATTCTCCCGAGAGGGCTTGCCACTTGGCTAAACAAGCTTTTGACGAGGCAATTGCAGAATTGGATACATTGAGTGAGGAATCATACAAGGACAGTACCCTCATAATGCAGTTGCTGAGAGACAATCTCACTCTATGGACATCTGATTTACCAGAAGATGGAGGTGATGAGAACGTCAAAGGTGCGGATTCCAAACCAGCGGCAGCACCAGCTCCCGGGCAGCATTAA 795 44.53 MSSAEKEREKQVYMAKLSEQAERYDEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKIIKSYRQKVEDELCKICTDILTIIDKHLIPSSTSSESSIFYYKMKGDYYRYLAEFKTDQERKDAADQSLKGYETASTTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDENVKGADSKPAAAPAPGQH 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 34846116 34850004 - Sed0004735.1 Sed07g1991 720855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1991 264 Pfam 14-3-3 protein 14 236 IPR023410 -
Sed07g1991 264 Coils Coil 14 34 - -
Sed07g1991 264 FunFam 14-3-3 protein epsilon 3 249 - -
Sed07g1991 264 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Sed07g1991 264 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Sed07g1991 264 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Sed07g1991 264 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Sed07g1991 264 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Sed07g1991 264 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Sed07g1991 264 MobiDBLite consensus disorder prediction 238 264 - -
Sed07g1991 264 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Sed07g1991 264 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Sed07g1991 264 SMART 1433_4 8 250 IPR023410 -
Sed07g1991 264 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Sed07g1991 264 PIRSF 14-3-3 2 248 IPR000308 -
Sed07g1991 264 Gene3D - 1 250 IPR036815 -
Sed07g1991 264 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Sed07g1991 264 Coils Coil 196 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0091 Sed-Chr4:543909 Sed07g1991 Sed-Chr7:34846116 2.60E-124 dispersed
Sed04g0092 Sed-Chr4:543909 Sed07g1991 Sed-Chr7:34846116 2.50E-124 dispersed
Sed04g3409 Sed-Chr4:43951037 Sed07g1991 Sed-Chr7:34846116 2.00E-105 dispersed
Sed05g1920 Sed-Chr5:32568589 Sed07g1991 Sed-Chr7:34846116 5.30E-106 dispersed
Sed07g1991 Sed-Chr7:34846116 Sed13g2133 Sed-Chr13:25976695 5.20E-101 dispersed
Sed07g1991 Sed-Chr7:34846116 Sed07g1992 Sed-Chr7:34846694 1.90E-143 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1991 K06630 - csv:101221275 466.077