Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1992 ATGTCGTCCGCCGAGAAGGAAAGAGAGAAGCAGGTCTACATGGCCAAACTCTCCGAACAGGCCGAACGCTACGACGAAATGGTGGAGTGTATGAAGAAAGTAGCTAAACTAGATGTTGAGCTGACAGTGGAAGAGAGAAATTTGCTCTCTGTTGGATACAAAAATGTTATAGGTGCTAGGCGAGCCTCTTGGCGTATCATGTCCTCGATTGAACAAAAGGAAGAGTCCAAAAGCAATGAGAATAATGTTAAAATTATTAAGAGTTACCGTCAGAAGGTAGAGGATGAGCTTTGCAAGATCTGCACCGATATTCTGACTATTATTGACAAGCACCTCATCCCTTCTTCTACCTCTTCAGAATCTTCGATTTTCTATTACAAGATGAAAGGTGATTATTACCGATATCTTGCTGAGTTCAAAACAGATCAAGAGAGAAAGGACGCAGCTGACCAGTCATTGAAGGGATACGAGACTGCATCAACCACCGCAAATACCGAACTCCCATCAACCCATCCGATCCGTCTCGGCCTTGCTCTCAACTTTTCTGTCTTTTACTATGAGATTATGAATTCTCCCGAGAGGGCTTGCCACTTGGCTAAACAAGCTTTTGACGAGGCAATTGCAGAATTGGATACATTGAGTGAGGAATCATACAAGGACAGTACCCTCATAATGCAGTTGCTGAGAGACAATCTCACTCTATGGACATCTGATTTACCAGAAGATGGAGGTGATGAGAACGTCAAAGGTGCGGATTCCAAACCAGCGGCAGCACCAGCTCCCGGGGTAGTTTTCTTTCGTGCATAA 807 44.36 MSSAEKEREKQVYMAKLSEQAERYDEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKIIKSYRQKVEDELCKICTDILTIIDKHLIPSSTSSESSIFYYKMKGDYYRYLAEFKTDQERKDAADQSLKGYETASTTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDENVKGADSKPAAAPAPGVVFFRA 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 34846694 34850004 - Sed0004735.2 Sed07g1992 720856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1992 268 MobiDBLite consensus disorder prediction 240 261 - -
Sed07g1992 268 Coils Coil 14 34 - -
Sed07g1992 268 FunFam 14-3-3 protein epsilon 3 249 - -
Sed07g1992 268 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Sed07g1992 268 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Sed07g1992 268 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Sed07g1992 268 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Sed07g1992 268 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Sed07g1992 268 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Sed07g1992 268 PIRSF 14-3-3 2 248 IPR000308 -
Sed07g1992 268 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Sed07g1992 268 Pfam 14-3-3 protein 14 236 IPR023410 -
Sed07g1992 268 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Sed07g1992 268 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Sed07g1992 268 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Sed07g1992 268 SMART 1433_4 8 250 IPR023410 -
Sed07g1992 268 Coils Coil 196 216 - -
Sed07g1992 268 Gene3D - 1 250 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1992 Sed-Chr7:34846694 Sed13g2133 Sed-Chr13:25976695 5.30E-101 dispersed
Sed07g1991 Sed-Chr7:34846116 Sed07g1992 Sed-Chr7:34846694 1.90E-143 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1992 K06630 - csv:101221275 456.447