Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2007 ATGGCAATCTCAAATCTCTGTCCAAGTCTTGTTTATGGAGTGATTTTGCTATCTGTTTTGTTTTGTGTGAGGTGCCAGAGCTTGTTTGAGACAGGTGAACCCCCATTGACGTTGGATTACTATGCCAAAACTTGTCCCAATGTGTTGCAGATTGTTAGGAAAGAGATGGAGTGTGCGGTCCTCGCCGACCCGCGCAATGCCGCTCTTGTCGTCCGCTTGCACTTCCATGACTGCTTTGTCCAGGGGTGCGACGGGTCGGTTCTACTAGATGACACGATAACATTACAAGGAGAAAAAAAGGCTTCCACGAACATACACTCCCTCAAAGGCTTCAGAATCATGGATAAGATAAAGAACAGCATTGAATCAGAATGTCCTGGGATTGTTTCTTGTGCAGATATACTCACTATTGCAGCTAGAGATGCAGTGATTCTGGTGGGCGGCCCTTACTGGGAGGTTCCTCTTGGAAGAATGGATTCCACAACTGCGAGTTATGAACTTGCAAACACAAATATTCCCTCGGCCAATGAGGGGCTTTTGAGTATCATCTCCAAGTTTCTTTATCAGGGTCTCTCTGTCACTGACATGGTAGCTCTATCAGGAGCGCACACCATTGGAGTGGCGAGGTGCGAGAATTTCAGGGAAAGGATCTATGGGGATTTCGAAGCAACTTCGGATTCCAACAACCCAATTTCCATGTCATATCTTGAGAAACTAAGATCCATTTGCCCCCCAGTTGGGAAAGTTGCAGAGAACAACATAACAGCAATGGACAATGTGACACCAGAGCTGTTTGACAATTCCTATTTCCACATTTTGATGAGAGGAGACGGGCTTTTGAATTCAGATCAAGAATTGTATTCCAGCCTTATGGGCTTGGAAACAAGGGCTCTGGTCAAGAAATATGCTGCTTATCCGCTTGCTTTCTTTCAGCAATTCTCTGATTCTATGGTGAAGTTGGGAAACATCACCAACTCTGATAGCTTTCTCACTGGGGAAGTTAGAAAAAACTGCAGGTTTATCAACACATGA 1032 45.06 MAISNLCPSLVYGVILLSVLFCVRCQSLFETGEPPLTLDYYAKTCPNVLQIVRKEMECAVLADPRNAALVVRLHFHDCFVQGCDGSVLLDDTITLQGEKKASTNIHSLKGFRIMDKIKNSIESECPGIVSCADILTIAARDAVILVGGPYWEVPLGRMDSTTASYELANTNIPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGVARCENFRERIYGDFEATSDSNNPISMSYLEKLRSICPPVGKVAENNITAMDNVTPELFDNSYFHILMRGDGLLNSDQELYSSLMGLETRALVKKYAAYPLAFFQQFSDSMVKLGNITNSDSFLTGEVRKNCRFINT 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 35039231 35042603 - Sed0019960.1 Sed07g2007 720871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2007 343 FunFam Peroxidase 173 320 - -
Sed07g2007 343 SUPERFAMILY Heme-dependent peroxidases 36 342 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PANTHER PEROXIDASE 72-RELATED 18 341 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 ProSiteProfiles Plant heme peroxidase family profile. 35 342 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 Pfam Peroxidase 52 304 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601(InterPro)
Sed07g2007 343 Gene3D Peroxidase, domain 2 173 320 - -
Sed07g2007 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Sed07g2007 343 CDD secretory_peroxidase 36 341 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed07g2007 343 Gene3D - 40 342 - -
Sed07g2007 343 FunFam Peroxidase 39 180 - -
Sed07g2007 343 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed07g2007 343 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2007 Sed-Chr7:35039231 Sed14g1158 Sed-Chr14:20964850 2.30E-77 dispersed
Sed13g1016 Sed-Chr13:8275705 Sed07g2007 Sed-Chr7:35039231 4.50E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2007 K00430 - csv:101216779 584.334